Hydractinia symbiolongicarpus: 130649427
Help
Entry
130649427 CDS
T09218
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsy03021
]
130649427
Transcription machinery [BR:
hsy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130649427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
TPR_Trm732_C
HEAT_2
Vac14_Fab1_bd
ResIII
Motif
Other DBs
NCBI-GeneID:
130649427
NCBI-ProteinID:
XP_057311687
LinkDB
All DBs
Position
7:19483661..19527856
Genome browser
AA seq
1839 aa
AA seq
DB search
MSTRLDRLLVILDTGSTPVTRKAAAKQLGEVQKLHPHELPNLLNRVLVYLKSKNWDTRIA
AAQAVEAVACNVPKWNPDGVKVKEEENHEDEKKVNDGKLKFEQFDILTVLERGEKLLGSA
GDEFDIEEDAALEGLSHQDAVTRQKRLLRRKLGLDMVGGLDMGMDNLFEDDDLVNNSKME
TKLTTQLSGENAADVVASQIAAISSDGQMSSREKNRAKRKAKSYAKQRSKEQENKSFDGS
ENGQPAEKRQRRTQSVLVEQPSEDKFLVDNVVNNSLALDELDNWPFEDFCVELCNDLFNP
AWEVRHGSSSALREIIKLHGDSAGKSKETQVLKMREANTSWLEDTALKLLCVFALDRFGD
FVSDEVVAPVHETCAQTLGTVLHHMTNESVLKVFSILIKLQEQNEWQVRHGGLLGLKYML
AVRKDMATELLPHTLPWILKGLQDGDDDVRAVAAAALLPVAEFLGTTFPNEVAVISTILW
DILLDLDDLTASTNSVMCLLASLVSINLNMQHENTDSNMSELVPRLWPFFKHNITSVRMS
SLKTLDIILSTSKSTSWLHSIIPEQMRQIYQRIVLENVDGIREAACKVWAMTVRCSPPQQ
LEQAIYHHAPTWFRLAIYPANVPIDGTLLTYDNVAGPMTGTEKGKADEAGRSYYIASTEM
EADTAVKDSNVLKSRISAARVFGILLTTLSSYSSSQPVVYILNAVETLLASSSAIQQMVG
AMVVNEWAKASVNVTCPQNIIVKMQQVLTNQIMYEELLSLHQRLQMDTQALVLLFREQNI
DISSSIPPGSYNLDSASMIATAKFNEFSLKLRPKDLKAAESKQQSLLVTIGNMQSEFQKL
YTRVQSSVAAALIALQQLPAKLNPVIRPIMDSVKKEEDSQMQKRTAVALAQLLMLCVNRS
PSPNGKIIKNLCSFVCNDTNQTPPVQLDGLLSNSNSPVPTEDGMTSSNNKSDASTCGTSL
GILTLHRKQKNAIQNLQSKRGRISRCNSSQAIKDASLTSSLFNQTETEENARILRIQRHG
AETALSSCADILGEHLPTALPSLWETMFIMLKDKVMDHKLVKQHMVDQEEIKQLITSMQV
LETTARSLHKALKIKLVQLLPNVITYLQYPFTCVRHMAARCLGTLSKIITTETMEIILTK
VVSILGQSDDIIGRQGAIEALVNVIDNLGIDILPYIVLLIVPVLGRMSDQVEDIRLMATS
CFATLVQLMPLEAGIPDPPCMSKVLIEKKESERRFLEQLLDGTKLDQFAIPIPIKCDLRK
YQQDGVNWLAFLKKYNLHGILCDDMGLGKTLQSICIMAADYHNTLKKYKISGKEEFRPLP
SLVVCPPTLTGHWCYEVEKFCHKEHLKPLHYTGSPNDRQRLRECFSKYNLMVASYDIIRN
DSDFFLSKHWNYCVLDEGHIIKNSKTKLSKVIRQLKANHRLILSGTPIQNNVLELWSLFD
FLMPGFLGSEKEFIARFGKPILQSRDAKSSSKEQEAGALAMEALHKQTLPFLLRRVKEDV
LQDLPPKITQDYYCDLSPLQVKLYEDFSRSRAKKDIDSTVSVDEKRETKQQTGHIFQALQ
YLRKVCNHPSLVLTPSHPEYDVVTQNLRQSKTPLSDLQHSGKLMALKQLLLDCGIGATEC
TSSEDTVNSVVSQHRALIFCQLKSMLNIVENDLLKSHMPSVTYSRLDGSVPAGSRHDIVQ
SFNNDPSIDVLLLTTHVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNV
YRLIARGTLEEKIMGLQKFKLNIANTVITQDNSSLHSMDTSQLLDLFTVDSGRDNEKKKA
GTSKNTSMKAIMEDMEELWDDKQYDDEYNLDNFMGSLKQ
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacgacttgatcgtttgttggtcatcctagatactggctccactcctgtcact
cgaaaagctgctgcaaagcaacttggtgaagtacagaagctacatcctcatgaattacca
aaccttctaaatagagttttagtttacttgaagagtaaaaactgggacacaagaattgct
gcagcacaagccgtagaagctgtcgcatgtaatgtgccaaaatggaatcctgatggtgtg
aaggtaaaggaggaagaaaatcacgaagatgagaaaaaagttaacgatggaaaactaaaa
tttgagcaatttgacatattaacagttttggaacgtggtgaaaaactgcttggttcagct
ggagatgaatttgatattgaggaggatgcagcattagagggactaagtcatcaagatgca
gttacccgtcaaaaacgactgctacgaaggaagctaggtttagatatggttggcggtttg
gatatgggaatggacaatctatttgaagatgatgatttagtcaacaacagtaaaatggaa
acaaaactcacaactcaactttctggtgagaatgctgctgatgttgttgcatcacaaatt
gctgcgatttcatctgatggacagatgagttcaagagaaaagaatcgagctaaaagaaag
gcaaagtcatatgccaagcaaagatcaaaagaacaagaaaataaaagttttgatgggagc
gaaaatggtcaacctgcagaaaaacgacaacgtaggactcaaagtgtacttgttgagcag
cccagcgaagataaatttttagttgataacgttgttaataattcgttggcactagatgag
cttgacaactggccttttgaagatttttgtgtggaactatgtaatgatctttttaatcct
gcttgggaagtcaggcatggcagttcgtctgctctgagagaaattattaaactgcatgga
gacagtgccgggaaaagtaaggagacacaagtactcaaaatgagagaggcaaacacatct
tggcttgaggatacagctttgaaactgctttgtgtattcgcattggaccggtttggtgat
tttgtttcagatgaggtggttgcaccagtccatgaaacatgtgcacaaactcttggcaca
gttctacatcatatgactaatgaaagtgttttaaaagtgtttagcatacttataaaactt
caagagcaaaatgaatggcaagttaggcatggaggactgcttggtttgaaatacatgctg
gctgtcagaaaggatatggctactgaacttctaccacatacgttaccttggattttaaaa
ggcttacaagacggtgatgatgatgttcgagctgtagctgctgctgcacttcttcctgtt
gctgaatttcttggcacaacatttcctaatgaagttgcggttatttcaactattttatgg
gatattttgttggatttggatgatctgacagcatccacaaacagtgtcatgtgtctttta
gcatcgcttgtttctattaaccttaacatgcaacacgaaaatactgacagcaacatgagc
gaactggtaccaaggttgtggccattttttaaacacaacatcacttccgtgcgaatgtct
tccctaaaaacactggacattattctgtcaacatcaaaaagtacttcttggctacattct
attatccctgaacaaatgaggcaaatttaccaaagaattgtattggagaacgttgatggc
attagagaagcagcgtgtaaggtttgggccatgactgtgcgatgttctcctccgcagcaa
cttgaacaagccatataccatcacgctccaacatggtttcgtctagcaatttatccagct
aatgtccctatagatggtaccctgttaacttatgacaatgttgctggccctatgacaggc
acagaaaaggggaaagcagatgaagcaggaaggtcttattacatagcctccactgagatg
gaagcagacactgctgtaaaagattcaaatgtgttaaagtcgagaataagtgcagcaaga
gtgtttggcattttattaacaacattatcatcgtattcatcctcgcaacctgttgtgtac
atactaaatgctgtggaaacattgcttgcctcttcttctgctattcaacaaatggttggc
gctatggttgtcaatgagtgggcgaaagcaagtgtgaatgttacatgtccgcaaaatatt
attgtaaagatgcaacaggttttaacgaatcaaataatgtacgaagaattgttatctctt
catcaacgtttgcagatggacacacaggctttggttttactattcagagaacaaaacatt
gatatatcttcctccattccaccaggttcatacaatcttgatagtgcgtctatgatagct
acagcaaagtttaatgaattctctttaaaactacgaccaaaggatttgaaagctgcagaa
tccaaacagcaatctttgttagttacaataggaaatatgcagagtgagtttcagaagctt
tatacaagagttcagtcaagtgtggcagcagcattgattgcattgcaacaactacctgcc
aaactaaatcctgtgatacgacctataatggattcagtgaaaaaagaagaagattctcaa
atgcaaaaacggactgcagtagcgcttgcacagttgctaatgttgtgtgtaaacagatct
ccttctcctaatgggaagatcatcaagaatctctgttcctttgtttgcaatgacaccaac
caaacaccacctgttcaactcgatggcttattgtcgaacagtaattcacctgtcccaact
gaagatggcatgacaagttcaaacaacaaaagtgatgcttcaacatgtggtacctcgctt
ggtattttaacacttcaccgaaaacagaaaaacgccattcaaaatttacaatcaaaacgt
ggaagaataagtcgatgtaattcttcacaagcaattaaagatgcttcattgacttcttcg
ctattcaaccagacagaaacagaggagaatgccagaattttaagaattcaacggcacgga
gcagaaacagcattatcttcttgtgcagacattttaggcgaacatctaccaactgctcta
ccatccttatgggaaacaatgtttatcatgctaaaagataaagttatggaccacaaatta
gtgaaacaacatatggttgaccaggaagaaatcaaacaactgatcacatcaatgcaagta
cttgaaacaacagcacggtcattacataaagcactaaagataaagctagttcaactgcta
ccaaacgttataacttatcttcaatatccattcacatgtgtcaggcatatggctgcaaga
tgtctgggtacattgagcaagataatcacaactgaaacgatggaaattattctcactaaa
gttgttagtattcttggtcaaagtgacgacatcataggaagacaaggtgccattgaggcg
ttagtcaacgtgattgataatttgggtattgatattctaccatatatcgttttgctcatt
gtgccagtccttggaaggatgagcgaccaagtagaagacattcgattgatggcaactagt
tgttttgctactcttgttcagctcatgccactagaggctggcattccagatccaccctgc
atgtcaaaagtactgatcgaaaagaaagaatctgaaaggcgttttttggaacaactactt
gatggaacaaagttagatcaatttgcaattcctataccaattaaatgcgacttaagaaag
taccaacaggatggagtcaactggctagcttttttgaagaaatacaatcttcacggtata
ctatgcgatgatatgggactgggtaagacactgcaatccatttgtataatggcagcagat
taccataacacgttaaagaagtacaagatttcaggaaaagaagagttcaggccgctccct
tctttggtggtttgcccacccaccttaacaggtcactggtgttacgaagttgagaagttt
tgtcacaaggaacacttaaaacctctgcactacactggttcacctaacgatcgccaaagg
ctgcgagaatgtttttcgaaatacaatttaatggttgcttcatatgacatcatccgcaac
gactcagacttcttcttatcaaagcattggaattattgcgttcttgatgaaggccatatc
atcaaaaacagtaaaacgaaattatcaaaagtcatcaggcaattgaaggcgaaccatcgg
ttgatactgtctggtacaccgatacaaaacaatgtacttgaactctggtcgctatttgat
tttctaatgccgggctttcttggttcggaaaaagaatttatagctcgatttggcaaacca
atcctgcagagccgagatgcgaagtcatcctcaaaagagcaagaagcaggagctctagcc
atggaggctttacacaagcagactctcccattcttgcttcgaagagtaaaagaggatgta
ctacaagatctgccacccaagatcactcaggattactattgtgacttgagtcctctgcag
gttaaactatacgaagatttctcaagatctcgagcgaagaaagacattgattccaccgtg
agcgtcgatgaaaaacgcgagacgaaacaacaaacgggtcatatattccaggccttacaa
tacctacgaaaagtgtgcaaccatccgtcacttgtattgacgccgtcacaccctgaatac
gacgtcgtcacgcaaaacttacgacagtcgaagacgccactttctgatttgcaacattct
gggaaacttatggccttgaaacagcttctgctggattgtgggattggtgctacagaatgc
acgagttcggaagatactgtcaactctgtagtgtcgcagcatcgcgcgcttattttttgc
cagttaaaatctatgcttaatattgtggaaaatgaccttctgaagtctcacatgccatca
gttacgtactcaagattggatggaagcgtcccagctgggtcccgccacgatattgttcaa
agtttcaacaacgacccttctattgatgtgctgttactcacgacgcacgtaggaggtctg
ggtttgaatttaactggtgctgacactgtcatctttgtagagcatgactggaacccaatg
aaagatttgcaggctatggatcgtgcgcatcgtatcgggcaaaagaaagtcgtaaacgta
tatcgattaatcgccagaggaacgttggaagaaaaaataatggggttgcaaaaattcaag
ttgaacatcgccaacacagtgatcactcaagacaactccagcctgcattccatggatact
tcccagcttctagacttgttcactgtcgacagtgggcgtgacaacgaaaagaagaaggct
gggactagtaagaatacttctatgaaagcaatcatggaggacatggaagaattgtgggat
gacaaacagtatgacgatgaatataatctcgacaattttatggggtcgcttaaacagtga
DBGET
integrated database retrieval system
