Hydractinia symbiolongicarpus: 130649830
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Entry
130649830 CDS
T09218
Name
(RefSeq) cartilage oligomeric matrix protein-like isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04145
Phagosome
hsy04512
ECM-receptor interaction
hsy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130649830
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130649830
09142 Cell motility
04820 Cytoskeleton in muscle cells
130649830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130649830
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsy04147
]
130649830
00536 Glycosaminoglycan binding proteins [BR:
hsy00536
]
130649830
Membrane trafficking [BR:
hsy04131
]
Endocytosis
Phagocytosis
Opsonins
130649830
Exosome [BR:
hsy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130649830
Exosomal proteins of colorectal cancer cells
130649830
Exosomal proteins of bladder cancer cells
130649830
Glycosaminoglycan binding proteins [BR:
hsy00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130649830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
130649830
NCBI-ProteinID:
XP_057311995
LinkDB
All DBs
Position
1:32385830..32400822
Genome browser
AA seq
1001 aa
AA seq
DB search
MLSIGLLLFLSTVNTLEVDILDSFNLKDGQNGVQATTSCKVGNGYYFGRTSNGITAVNEV
LKEVVELLTQHHSFIITFKVRPEPYHKGSILWLEQKRTATPLFGLWMRSGKTGKYGLQFY
GKTGVEYVTLQDTTKYDDVEWHTATLHFHKQKKKSLVSLYVNCKLVDKKKARVLIKNGPK
DGLELRLGQREIAGKIFSRFKGSLTNFRLIFQRNISTYLQQNKCKPPTEPSYAPPAENPF
KNLPFKSVAGATATTRSILSSLSANEISSIFRHLENHGNNVPSSSKLQEIVSLLKDVRAR
QDNQVFEMKSLKELVLLGGRRDNVFQTSSNQNISNACSSSPCYPFVTCVSTGETFTCGKC
PVGLEGDGVNCKDINECDELPCSSVSRCENKFPGYMCHACPKGYRGEEVIGIGREFARLK
KQECRDIDECKENLHSCDKHSKCTNTPGGFKCGNCNPGFKKNRQGKCLPIEMCTGKDVCS
VYATCERSVHGARCTCRAATAGDGYVCGNDQDGDGYPDVDLNCDDAHCKKDNCPSVPNSG
QEDVDGDGEGDACDVDIDGDGIHNAMDNCPYVANKGQTNSDSDEHGDECDNCMFVFNPDQ
EDHDQDGKGDVCDRDMDGDGELNFIDNCKTVKNADQMDRDKDGAGDVCDNCPDTYNPKQK
NIDGDRYGDKCDNDIDNDKDGHIDKFDNCPHEANADQLDTDSDGKGDACDDDDDGDGVAD
NVDNCHLVANPAQSDFDGDGVGDVCQGDEDGDGKLYDDTCPQNKYVSTTDFTRHDVVLLG
TMDRQAQKHPKWALHDQGREIVQERNSAPSLILSKNSFNGFDFTGSVFVNTRNDDDFIGF
AFGFQNVRKFYLLSWKQKTQSYWRSKPSYLSTAKAGIELKYIHSSTGQSFDLRAAIWHSG
NVTNQVTQLWRDKAERGWEDKVPYKWFLMHRPSMGLIRLKVYRRSAILLDTGYIIHNDIK
GGQLGPYSFSQSGMIWSDVKVTCNEEIPEDILAAIQPKKSN
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcatcggcttattgttgtttttgtcaaccgtcaacactttggaggtggacatt
cttgattcttttaacttaaaagatggtcaaaatggtgtgcaagctacgacaagctgcaaa
gtgggaaatggttactattttggtcgaacgtccaacggtataactgctgttaatgaggtt
ctaaaagaagtggtcgaacttctcacacaacaccattcgtttattatcacgttcaaagta
agacccgaaccataccataaagggtctattctctggttagaacagaagcgcacagcgaca
ccattatttggactgtggatgaggtcgggaaaaactggaaaatatggtttgcaattctac
ggaaagactggagttgaatatgttacgctgcaagatacaactaagtacgatgatgttgaa
tggcacactgctactctgcattttcacaaacagaagaaaaagagtttagtaagcttgtac
gtcaactgcaaattggtcgataagaagaaagctcgagtgttgattaaaaatggaccaaaa
gatggtttagaactacgtctaggacagcgagaaatagctggaaaaattttctccaggttt
aagggcagtttaaccaactttcgtttaatatttcaaagaaatatatcaacgtatttgcaa
cagaataaatgcaaacctccaaccgaaccatcctatgcaccgcctgcggagaatcctttc
aagaatttgcccttcaagtcggttgccggtgcaacagcaaccacacgctcaattttgtca
tctctgtcagcaaatgaaatttcatccatctttcgtcatttggaaaaccatggcaacaac
gtgccgtcatcgtcgaaattacaagagattgtgtcgctcttaaaagacgtccgggcacgc
caagacaatcaggtatttgaaatgaaaagtttgaaagaattagtactgttgggaggcagg
cgagacaatgtattccaaacatcgagcaatcagaacatttcaaacgcatgctcttcgtcg
ccatgttatccgtttgtaacttgcgtgtcaacaggcgagacatttacatgtggtaaatgt
cctgtgggtttagaaggggacggtgtcaattgtaaagatattaacgaatgtgatgagcta
ccctgttcgtccgtatcaagatgcgagaataaatttcccggatatatgtgccacgcatgt
ccaaaaggctaccgcggagaggaagtgatcggaattggtcgagagtttgctcgtctcaaa
aaacaggaatgtagagacatagatgaatgcaaagagaatcttcattcttgtgataaacat
tccaagtgtaccaacacacccggcggttttaaatgcggtaattgcaacccggggttcaaa
aaaaatcgacaaggaaaatgcttacctattgaaatgtgtacaggaaaagatgtttgctct
gtttatgcaacatgcgaacgttcagtgcatggtgctcgctgtacttgtcgtgcggcaaca
gcaggtgatggctatgtatgtggcaacgatcaagacggtgacggatatcctgacgtcgac
ttaaattgtgatgatgcgcattgtaaaaaagataattgcccctctgtaccaaatagtgga
caggaagacgttgatggcgatggtgaaggcgacgcttgtgatgtcgatattgacggcgac
ggtattcataacgcaatggataactgtccatacgtagcaaacaaaggacaaacgaacagt
gacagtgatgagcatggcgacgagtgtgacaactgcatgtttgtctttaatcctgatcaa
gaggaccacgatcaagatgggaagggagatgtatgcgacagagacatggacggagacggt
gagctaaattttattgacaactgcaaaactgttaaaaatgcagaccagatggatcgagac
aaagatggcgcgggggatgtgtgcgacaattgtccagatacatataatcctaagcagaaa
aacattgatggcgacagatatggtgacaaatgtgacaatgatattgacaatgacaaggat
ggacacattgacaaatttgacaactgtccacatgaagcaaacgctgaccaattagataca
gattctgatggaaaaggtgacgcttgcgatgatgacgacgatggagacggtgttgcagac
aatgttgataactgccatctagttgccaacccagcacagagtgattttgacggtgatggt
gttggagacgtctgtcaaggggatgaagacggtgacggtaaattatatgacgacacttgt
cctcaaaacaagtatgtttccacaacagatttcacacgtcatgacgttgtgttactgggg
acaatggatcgacaagctcaaaaacatccgaagtgggccttacatgatcagggtagggag
atagtacaagagagaaattcggcgccatctttaattctaagtaagaacagtttcaatgga
ttcgattttactggaagcgtttttgtgaacacgagaaatgatgatgatttcattggattt
gcttttggttttcaaaatgttcgaaagttttacttgctgtcttggaaacaaaaaacgcaa
agctattggcgcagcaagccatcatacctctccacggcgaaagctggtatcgaattaaag
tacattcattcgtcaactgggcagagttttgacttacgtgctgctatttggcattctgga
aacgtcactaatcaagtgacacaactatggcgggataaagcggagcgaggttgggaggac
aaagtgccgtataaatggtttttaatgcatcgacctagcatgggacttataagattaaaa
gtttatcgacgtagcgccattttgctagatacaggatacatcatacacaacgatatcaag
ggtggtcaactcgggccgtattctttcagccaatcaggaatgatatggtcagatgttaag
gtcacatgtaacgaagagatacctgaagatattttggcggctattcaaccaaaaaaatcg
aattag
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