Hydractinia symbiolongicarpus: 130653847
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Entry
130653847 CDS
T09218
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsy03041
]
130653847
Enzymes [BR:
hsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130653847
Spliceosome [BR:
hsy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130653847
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
zf-CCHC
ResIII
CMS1
KH-I_KHDC4-BBP
KH_KhpA-B
zf-CCHC_2
KH_2
Cas3-like_C_2
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
130653847
NCBI-ProteinID:
XP_057312332
LinkDB
All DBs
Position
8:22120646..22124866
Genome browser
AA seq
692 aa
AA seq
DB search
MPYIRLIKIFIPFYLHRGRGANLDWRANNSNSTYSPESQSFNSSLRSRRENGFDRQTETK
QGFNSSNSRRNDVLRIEVLNDNVGKMIGRGGCKIKEIQATSGARVRVLQDEASLSVTPVE
ITGTTEQKTKAKQLIEDCTISAGDIQSWADRENRNFEQKSLSTPKIDWAMLKKKAETFEK
MKWADCPDVKKNFYTEKKKIANMDPLEVAEIRKNKNSITVQDLSKEQNQKIPNPVLSFED
AFDPFPEILETIRANKFTEPSPIQCQAWPVLLSGSDCIGIAQTGTGKTLAFLLPAFIHID
QQPVERNARGGPSCLVLSPTRELAQQIEMEVKKFHYRGIKSVCIYGGGDRNSQISQIKKG
VEIVIGTPGRLNDLLMNNFFSVKSVTYLVLDEADRMLDMGFEPEIKKILLDIRPDRQTVM
TSATWPSDVQRMADKYLRNPIRVNVGSLDLQACHSVTQLIEFINTEDKQERVLQFITSMD
KDDKLLIFVGRKITADDISSNFAMREDLDIGIQCIHGDRDQSDREQALEDMKTGRARVLI
ATDVASRGLDIKDLTHVLNYDFPRHIEDYVHRIGRTGRAGRSGCALTFVTREDWMHVGKL
IPIMEEAGQDIPDELVEMAERWQKNRDRMAEERNACGGGRGGDGRGCFKCGKEGHFSREC
PEGGGFGGRGRRGGGRGRRDRGGITIPLYGAI
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgccttacatcaggctgataaaaatatttatacccttttatcttcacagagggagagga
gcaaatttagattggagagcaaataactcaaatagcacttacagtcctgaaagtcaaagc
ttcaatagttcactgagaagcagaagagaaaacggatttgatcgtcagacagaaactaag
caaggttttaactcctcaaatagcagaagaaatgatgtattacgaattgaagtcttaaac
gataatgttgggaaaatgataggtagaggtggttgtaaaataaaagagattcaagcaaca
agtggcgctagagttcgagtcttacaagatgaagcttcattatctgtcacacctgttgag
attactggcactacagagcaaaaaactaaagcgaaacaactaattgaagactgtactata
tcagccggtgatatacaatcttgggcagacagagaaaatagaaattttgaacaaaagtct
ttgtcaacgccgaagattgactgggctatgttaaaaaagaaggcagaaacttttgaaaaa
atgaaatgggctgattgcccagatgtcaagaaaaacttttatacagagaagaaaaaaatt
gctaatatggatccattagaagtagcagagataaggaaaaataagaacagtataacggtg
caagatcttagtaaagaacagaatcaaaagatacctaatcctgtgttgtcgtttgaagat
gcatttgatccttttccggaaatattagagaccattagagctaataaatttaccgaaccg
tcgccaattcagtgtcaagcttggcctgtccttctctcaggttcagactgtattggaatc
gcacagactggaactggaaagacactcgcctttcttctaccagcattcatacatattgac
caacaaccagtggaaagaaatgctcgaggtgggccatcctgcttggttttatcacccacg
cgagagttggcacaacaaatcgaaatggaggtgaaaaagtttcattatcgtggaattaaa
agtgtttgtatatatggtggtggtgatcgtaactctcagatcagtcagattaaaaaagga
gttgagattgtcatcggtactcctggtagactgaatgatttacttatgaacaattttttt
tctgtaaaaagtgtcacatatttggttctcgacgaggcagaccgtatgttggacatgggg
ttcgagcctgaaataaaaaagatattacttgacattcgaccagaccgtcagactgtcatg
acaagtgccacttggccatctgatgttcaaagaatggcggataaatacctgcgaaatcca
atacgtgtaaatgttggttcattagatttgcaagcatgtcattcagtcacgcaactgatc
gaatttatcaacactgaagataaacaagaacgagtactacagtttataacatcaatggac
aaagatgacaaacttcttattttcgttggccgtaaaatcacagctgatgatatttcatca
aactttgccatgcgtgaagatctcgatataggtatacaatgtatccatggcgatagagac
caatcagatcgtgaacaagcgttggaggatatgaagacaggtagagcgcgtgtgttgatt
gcaactgatgtcgcctcaagaggtctggatataaaggatttgacacatgtattaaattat
gattttcctcgccacatcgaagattatgttcatcgaatcggtcgaactggccgtgcgggc
cgatcaggctgcgcactgacgtttgtcacgcgtgaagactggatgcacgtgggcaagcta
attccaatcatggaggaagcagggcaggacatacctgatgaattagttgagatggctgaa
cgttggcagaaaaatcgagatagaatggcagaagagagaaacgcatgcggtggtgggcgt
ggtggtgatggaagaggttgttttaaatgtggcaaagaaggtcatttttctcgtgaatgt
cctgaaggtggtggatttggtggcagaggacggagaggtggtggaagagggaggagagat
cgtggtgggataaccattcctttgtatggtgcaatataa
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