Hydractinia symbiolongicarpus: 130654001
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Entry
130654001 CDS
T09218
Name
(RefSeq) nucleoporin p58/p45-like
KO
K14307
nucleoporin p58/p45
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130654001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130654001
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130654001
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Nucleoporin_FG2
Nucleoporin_FG
DUF1664
Lipoprotein_7
Motif
Other DBs
NCBI-GeneID:
130654001
NCBI-ProteinID:
XP_057312488
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Position
8:7242663..7256320
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AA seq
494 aa
AA seq
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MAAGFSFSAQPSLFGGKPAGNTTSTGSGFGTSSLQSNSLFGAKTTTTPQINFGGFGSTTT
PPTSQSSLFGAKSTASTTSSFGSAGFTGLQSKTTSTTGFSFGTPAIATSGTSLFGSLAKT
TASTGFSLFGAKTTTTTAPTLGLGGKTTFGFGSTPASGFPLTSTSIATSNAAKPVENPKE
EKLPEEISTLVTELEKFIKTQKDVKEEITKISSEGITKTKQDIVGLKQGLALIANGLQRD
SMAVENLKREVGQELNNAEVAHRIKDAAASLQHDFSASMEYFSRLVYSFETRMNFYRKEI
EELETFLSTSTPRTDFTPQDLSNVLKRVNESFVGLASELHQVHESVKVLKDHYMHFRRIA
YSDMTDPFAARKKLQDKGTSNLIGPSPFPMVQGATIMSSTFQPENKATTIGLSNPIGFGS
AFSKPVASGLTRSLSFGGTGKSTGFGLGSTLSAGGSLFNKTSTGTTAGLNLAVPASNTSS
FVLQKPPSGKRGKF
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggattttctttctcagcgcagccaagcctctttgggggaaaacctgcagga
aatacaacttccacagggtctgggtttggaacttcgtcattacaatccaatagccttttt
ggtgcaaagacaacgacaacaccgcaaataaattttggaggattcggatcaacaacaaca
ccacctacctcccagtcaagtctctttggagctaaaagtactgcttcaacaacatcctcg
tttggatctgctggatttactgggcttcaaagtaaaacaactagtacaactggattttcc
tttggaacaccagcgattgctacctctggaacgagcctgtttggatctctcgcaaaaaca
acagcatcgacagggtttagtttgtttggtgcaaaaacaacaacaacaacagctcccaca
cttggtttaggtggaaaaacaacttttggattcggctctactcctgcatctggatttcct
ctgacatcgaccagtatagcgacatccaatgcggcaaaaccagtcgagaatccaaaagag
gagaaacttcctgaagaaataagcactttagtgactgaattagagaaattcatcaaaacg
caaaaagatgtcaaggaggagatcacgaaaatatcttcggagggaatcaccaaaacaaaa
caagatatagttggattgaagcagggtttagcgttaatagcgaacggcttacagagggat
tctatggctgtggagaacctaaagcgagaagtgggacaggaattgaacaacgctgaagtt
gcccatcgtattaaagacgctgcggcgagtttacaacacgattttagtgcatctatggag
tacttctctcggttggtatactcctttgaaacgcgaatgaatttctatcggaaagaaatt
gaagaactagaaacatttttatcgacgtcaacacctagaacggattttacaccgcaggat
ctctcgaacgttctgaagagggtaaacgagtcattcgtcggtttagcttcagaacttcat
caagtacacgaatccgttaaggttcttaaagatcactacatgcattttcgacgcattgct
tacagcgacatgacggatccgtttgcagctcgaaagaaattacaagacaaaggtacaagt
aacttgataggaccgtccccgttcccaatggtgcaaggagctaccatcatgtcatcaaca
tttcaacctgaaaataaagcaaccacaattggtttatcaaaccctatcggattcggttca
gccttttcgaaacctgttgcttctggtctgacgcgaagtttgtcattcggtggtaccgga
aagtccactggctttgggttgggatctaccttgagcgctggtggttcgttgttcaacaag
acgtcaacaggcacgacagctgggttgaacttagcagttcccgccagtaatacgtcatca
tttgtacttcaaaaaccgcccagtggaaaacgcggaaaattttaa
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