Hydractinia symbiolongicarpus: 130654154
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Entry
130654154 CDS
T09218
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130654154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130654154
03036 Chromosome and associated proteins [BR:
hsy03036
]
130654154
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130654154
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130654154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
130654154
NCBI-ProteinID:
XP_057312676
LinkDB
All DBs
Position
8:26228867..26250707
Genome browser
AA seq
1794 aa
AA seq
DB search
MFGAKTPFGGGGFGSTTTNAFGTQQTPSFGTGLFGNKTPSAGAFGTPSFGTPSSGGLFGG
TSSGSNIFGAKPAQSGFGFGATGTSSGGLFGASTGSSLFQNTPQTSNAFGKTSGISGFGS
SNSAFGATSGSSLFGGGTSTSSNMFGGTTAFGQPSSGTTTKFVPVTSTESTQKSGVSMTV
KTQNQCITIMDAYKDKSVEELRLEDYAAGRKGSAGSTFGASTGLFSNTSASTGTSIFGNT
AKFGQNTSTGLFGNTSSGGLFGAKTTSSIFGSIPTTSTSGIGGFGTGSTNLFGNTPSVFG
QAATSSSGSLFGNNNTLFGNTSTGFGSTSQGTGLFSASKPLIGSNTGFGTTGGFGSATST
GGGLFGATSKPGFTFSTGTTGFGATSNTGLFGGTSGGLFGNKSTGFGTTGFGTSTGTTGS
LFGGSTLGGGTTGFTGFGSTQNTGLGGSSLGGLSNVDQNTLAAIRQQQMMQQQLKAIANT
PFGDSPLFRNLAATGDKKDASKNHGLFSVGVANKEPMNASQYKVFSRPAAKVKLHPVSSP
SLGKSRLFDGLEDEGDFSPHPLNPRRSVKKLVIKNKPFPEVDSSYEEGQLKLRSFNDADD
DLIAPSPEVIKTKNINETGGSQMSTDGTKQSTMFDNTITELNAAEKTPIFKKQAKNYVLT
PLSDSVEEAVEGRNDKTEVDDEYKVPKSGIILRRAEYYTKPPLDSLDDQVRDDQCLVRDF
TVGREGYGEVKFLGVTNVYNLDLDKIVFFQRREVEVYPDNYENKPQVSEELNKPAEITLL
KVWPNDKSSHTPVKTPERLKASGFIDRLEEKTLAMDAVFVDYRPQEGAWVFKVNHFTRYG
IQEQYIGEGVNVERRKKILREKIVEDNTNFVDFQKDDEDIVVLTKDEVKMKLKQKIAQIQ
STRKAAEMENQLENSDSDIVDDDDDDGEDENDEEGDDEILTEPENKENIMDVAEEDFMPL
SHQLGRIAHVQPFHLQGMKTSILYDDEDEENRPTPKTMLRSKSLFSNKSIFNSSYIENKQ
TTFTKLDTSKSTSLAQDTLNNSVFLNVTSEKLTNVGNSAKIQKKSHLFKSGLSLQNSFAQ
EETKSMPDVERPVENNMFIKCRTYSLVSHEKSLLFGRASMLADSGLVHGREFNIGWTNKL
TFLHSGEKLGLTTDGTRKHFNIFQSNFTQSNSSFGLTDNNVYMEAFQSPTNEGLNQYIEN
CLSAALKHTQFEEREDSPLGLLKIKSPTSVIAEYAEIAKGFKQGTVGRNSHELTLQSCVW
DLVSALWGQQETDETGSMYEVHSSRKLALSKWLATAVENDVRAEIEANKTKDDGHLAVIF
NLLSGNQVQAACEVARENKEMRLSFLLAQITGDHHLKQYIRNQLSQWEERNIDEFISGDR
LKLYVLLSGMMVWKSTTHHINLCDNVKWKRSLGLHLWYYCSSTATILDAFTEYQNSFKGT
DTYEAYAVFPSPDYSSDAAADDRTKDLCYHLLALYCKRSHSLENMLTPKTYTSNQLDYHL
SWHLHQVLDELGYNHMTEERHSFLQCEYASQLENIGLWHWAIFVLMHLQDDVRREYSVKD
ILNRNCQSNDDEEAEFNLSKEEEMIVDQFKVPVQWLHEAKALHCKYTKRYYEETVHLIRA
AQWDKAHVVLLNHLAADSIIEEEYETLKKLLQDLNLPERCCTIKNWRIGGQVFLDYIMLN
EKLEDIRENKNTMTSYHLEDMEAEIASLINRISLMKVKNSREKLCQSEMARTCSNMLKIV
FSLLKEEMVDEEHPKWSSVKVVPYVVDLPLPPDYYLKELRELLANFADEIENPS
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcaaaaactccttttggtggtgggggttttgggtctactaccacaaatgca
tttggaactcaacaaacaccatcatttggaacaggattatttggtaacaaaactccaagt
gctggtgcattcggaacacctagttttggtacgccttcatctggaggtttatttggtggt
actagtagtggatcaaacatctttggtgcaaaacctgcacagtctggttttggatttggt
gctactggaacttctagtggtggtttgtttggtgctagtacaggatccagtctattccaa
aacactccacaaaccagcaatgcctttggtaagacatctggaatttctggctttggtagt
agtaatagtgcatttggtgcaacgtctggatcatcattatttggtggaggtacttcaaca
tcttccaacatgtttggtggtaccactgcctttggacaaccatcttcaggtactactaca
aaatttgtgccagtaacaagcacagaaagcacacaaaaaagtggtgtctcaatgactgta
aaaactcagaatcagtgcataacaatcatggatgcttataaagataaatctgttgaggaa
ctgcggctggaagactatgctgctggaagaaagggtagcgctggctcaacatttggtgct
agtactggtttgtttagcaacactagtgctagtacaggaacatcaatatttggaaataca
gctaaatttggtcaaaatactagtacagggctatttggaaatacatcaagtggaggcttg
tttggtgctaaaacaacttcctctatatttggatcaattccgactactagtactagtggg
ataggtggtttcggaactggatctacaaatttatttggaaacacaccaagtgtctttggt
caagctgcgacgtcatcatctggtagtttgtttggcaacaacaatactcttttcggtaat
acttcaaccggttttggctctacatctcaggggactggtctgttttccgcaagcaagccg
ttaataggatctaatacaggatttggaacaacaggtggtttcggcagtgcaacatcaaca
ggtggaggcttatttggagccacatccaaaccaggatttacatttagtacagggactaca
ggttttggtgctacatcaaacacaggactttttggaggtacatctggaggtttgtttgga
aataagtctactggttttggtacaacagggtttggaacttccactggtaccacgggaagc
ttatttggcggctccactttaggtggtggaaccactggtttcacaggttttggaagtacc
caaaatacaggccttggtggatcaagtttagggggcctgtccaatgttgaccagaataca
ttagcagccatacgacagcagcagatgatgcaacaacaattaaaagcaatagcaaacacg
cctttcggtgattcacctctttttcgcaacttagcagcaacaggggacaaaaaggatgcc
agtaagaatcatgggctgttttcagttggcgttgctaataaagaaccaatgaatgcatca
caatataaggtattttcaaggcctgcagcaaaagtaaaactccaccctgtttcatcacca
tctcttggaaagtctcgcttgtttgatggtttggaagatgaaggagattttagtccgcat
ccacttaatccacgcagaagtgtgaaaaaacttgtcatcaaaaacaaaccttttccagaa
gtggattcttcatacgaagaaggtcagctgaaattgagatcattcaatgatgcagacgat
gatttaattgctccctctccagaggttatcaaaaccaaaaatattaatgaaaccggtgga
agtcaaatgtcaacagatggaacaaaacaatccacaatgtttgataacactattacagaa
ttgaacgcagctgaaaagaccccaatatttaaaaagcaggctaaaaactatgttttgacg
ccactctccgattcggttgaagaggcagtagaaggcagaaatgataaaactgaagttgat
gatgaatataaagttccgaagtctggaatcattttaagaagagctgaatattatactaag
ccaccacttgattctttggatgatcaagttcgcgatgatcaatgtttagtcagagatttc
acagttggtagagaaggctatggcgaagtcaaatttttgggagtcacaaatgtttataat
ttggatctagacaaaatcgtgttttttcaacgtagagaggttgaggtctatccagataat
tatgaaaataaaccccaagtcagtgaagaattaaataaacccgctgaaatcacattgttg
aaagtttggccaaatgataaaagttcgcacacaccagttaagacaccagagaggttaaaa
gcttcaggttttattgatcgcctggaagaaaaaactttagcaatggatgctgtatttgtg
gattaccgtccccaagaaggggcttgggtttttaaggtcaatcattttacacgctatgga
attcaagagcagtatattggagagggggttaatgtagagcgtcgaaagaaaatattgcgt
gagaagattgttgaagataacacaaattttgtcgactttcagaaggatgacgaggatata
gtcgttctcacaaaagatgaagtgaaaatgaagttgaaacaaaaaattgctcaaatccaa
agtacccgaaaagctgcagaaatggaaaatcaacttgaaaattctgatagtgatattgtg
gatgatgatgatgatgatggggaagatgagaatgatgaggagggggatgatgagatttta
acagagccagaaaataaggaaaatattatggacgtggctgaagaagactttatgcctttg
tctcatcaactgggaaggatagcgcatgtacaaccatttcatctacagggaatgaaaacg
tctattttatatgatgatgaagatgaagaaaacaggccgactccaaaaaccatgcttaga
agcaaaagcttgttttccaataaatcgatatttaacagttcttacatcgaaaacaagcaa
actacgtttaccaagctggacacctccaaaagcacttcccttgctcaagatacattgaac
aattcagtttttcttaacgttacttcagagaagttgactaacgttggtaattctgcaaaa
atacagaaaaaatctcacttgtttaaatctggattgtcgttgcaaaattcttttgctcaa
gaagaaacaaaatcaatgccagatgttgagcggcccgttgagaataacatgttcataaaa
tgcaggacatatagtttggtatctcatgaaaagtctttactatttggtagagcttcaatg
cttgcagattctggcttagttcatggtcgtgagtttaatattggctggacaaataaacta
acatttcttcacagtggagaaaaattgggtttaactacagatggaacacgaaaacatttt
aatatatttcaaagtaattttacgcaatcaaactcctcttttggtttaacagataacaat
gtatatatggaagcttttcagtcaccaaccaacgaaggattgaatcaatatattgaaaac
tgtctatctgcggctttaaaacatacacaatttgaagaaagagaggactcccctcttggt
ctgctgaaaataaaatctcctacgtcagttattgcagaatatgcagagatagcgaaagga
ttcaagcaaggaacagttgggaggaattctcatgaattaacgttgcaatcttgtgtttgg
gatttggtatcagctttgtggggtcaacaagaaacagatgagacaggttcaatgtatgaa
gttcattcttcacgtaagcttgcattatctaagtggttggcgactgccgtagaaaatgac
gtaagggctgagattgaggcgaacaaaactaaagatgatggtcacttagctgtgattttc
aacttgctgtcagggaaccaagttcaagcggcgtgcgaagtagctcgagaaaataaagaa
atgcgtttatcttttttgctggcgcaaattacgggtgatcaccatttgaaacaatatatt
cgcaatcagctgagccaatgggaagaaagaaacatcgatgaatttattagcggtgatcgg
ctgaaattgtacgtgctattatctggcatgatggtttggaagtccacaacacatcatatc
aatttatgtgataacgtcaaatggaaaagaagtttaggacttcatttatggtactactgt
tcttccactgctaccatattggatgctttcacagaatatcaaaattcttttaagggaaca
gacacgtatgaagcttatgcagtttttccatcgccagactattcttctgatgctgctgct
gatgataggacaaaagatttatgttaccatttgttggccttgtattgtaaacgttcgcat
tcattggagaacatgttgacgccaaaaacatatacttctaaccagctagattatcatttg
agttggcacctgcaccaagttttagatgagcttggttataatcatatgactgaagagagg
cacagtttcctgcaatgtgaatatgcttctcaactagaaaacattggcttgtggcattgg
gctatctttgttttgatgcatttacaagatgacgtcaggcgggaatacagtgttaaggat
attttaaatcgaaactgtcaatcaaacgatgacgaggaagctgaatttaatctgtctaaa
gaagaggaaatgatcgttgatcaatttaaagttccagtgcaatggttacatgaagctaag
gcgttacattgtaagtacacaaagcgatattatgaagaaacagtgcatctgatcagagct
gcacaatgggacaaagcacatgttgttctccttaatcatcttgctgcagattccatcata
gaagaggaatatgaaacgctaaagaaattactgcaagatctcaatttacctgagcgatgt
tgcacgatcaaaaattggaggattggcggccaagtatttttggattacataatgttgaat
gaaaaattggaagatatacgagagaacaaaaacacaatgacgtcataccacttagaagat
atggaggcagagatcgcctcccttattaatcgcatcagtctaatgaaagtaaaaaattct
cgtgaaaaactttgccaatcggagatggctagaacttgttcaaacatgttaaaaatagtt
ttctccttgctgaaggaagaaatggtagacgaagaacatccgaaatggtcatctgtcaaa
gttgtaccgtacgtcgtcgatttaccgctacctccagactactatttgaaagaacttcgg
gaattgttagcaaattttgctgatgaaattgaaaatccttcttaa
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