Hydractinia symbiolongicarpus: 130654180
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Entry
130654180 CDS
T09218
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-2-like isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsy04121
]
130654180
Enzymes [BR:
hsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130654180
Ubiquitin system [BR:
hsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130654180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
Torus
zf_CCCH_4
zf-CCCH_2
zf-C3HC4
zf-RING_2
zf-CCCH_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-rbx1
zf-C3HC4_2
RING_XB3-XBAT31
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
130654180
NCBI-ProteinID:
XP_057312703
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All DBs
Position
8:11368381..11373591
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AA seq
407 aa
AA seq
DB search
MEKNTSQCKYFVYGACSKGKSCIYAHDLNAKKDNVCKFYLAGTCTYGATCRYDHVKQKQK
VLKPTTLSSQIEKTGNLCVLKKKITAKEFNQNWIQAAEFIPGKKYHASTEEEEEPKELSP
HKTVSTEMPYSTIASLNLDDFYDSSVQEEDCSFTYEGDSSDLLCPFAAVRECPYGESCEY
QHGDRCDICDLQCLHPNDEKQRSGFEIRRLRMLVLTVKCRFNLISFLVDHRSKCLAHHED
EMKRAFAAQRSDGVVCSICLDVVKEKSDMTERMFGLLENCDHAFCLSCIRNWRSSSHQDK
TVVRSCPICRVSSWFVTPSEFWISDAEEKKTIIDNYKNYLSTKSCRNFDQGRGECRFGSS
CFYKHEFPDGNLDVSKPNLRYRENSEGLSQALQTTRLSEFIAVRDAT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatacttcacaatgcaaatattttgtatatggagcatgttcgaaaggaaaa
tcttgcatctatgcgcatgacttaaatgcgaagaaagataatgtatgcaagttctatctt
gctggaacatgcacgtatggtgccacatgccgttatgaccatgtgaaacagaaacaaaaa
gttttgaaaccaactactttatcaagtcagattgagaaaacgggaaatttgtgcgtattg
aaaaagaaaattactgcgaaggaatttaatcaaaattggatacaagcggccgagtttatt
cctggtaaaaagtatcatgcatcaacagaagaagaagaagaaccgaaagagctttccccc
cacaagacagtatcaactgaaatgccttattcgacgatcgcttctttaaacttggacgat
ttttacgactcgagtgtacaagaagaagattgtagttttacttacgaaggtgatagtagt
gatttgctttgtccttttgcagctgtacgtgagtgtccatatggagaaagttgcgaatat
caacatggtgatagatgcgatatctgcgacttacaatgtcttcatccaaacgatgagaaa
caacgatcaggttttgaaataagacggttgcgtatgttagtgcttactgttaaatgcagg
tttaatttaatatcatttctcgtagatcatcgaagtaagtgtctggctcatcatgaggat
gagatgaaacgtgctttcgctgcgcagagaagcgacggcgtggtatgttccatttgtttg
gatgtcgtgaaagaaaaatccgacatgacggagaggatgtttggtttgctagagaattgt
gatcacgcattttgtttaagttgtattcgaaactggagatcgtcttcacatcaggataaa
actgtcgtcagatcatgtccaatttgtcgggtttcgtcgtggtttgtcactccaagtgag
ttctggataagcgatgctgaagaaaagaaaaccatcattgacaactataagaactatctt
agtacgaaatcttgtcgaaattttgatcaggggcgaggtgaatgccgttttggttcaagc
tgtttttacaaacacgaatttcctgatggaaatctcgatgtcagtaaaccaaatcttcga
taccgtgaaaattcagagggtctgtcgcaagcgcttcaaacaacaaggttgagtgaattt
atcgctgttcgtgatgccacgtaa
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