Hydractinia symbiolongicarpus: 130654308
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Entry
130654308 CDS
T09218
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130654308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsy03041
]
130654308
Spliceosome [BR:
hsy03041
]
Complex A
U1 snRNP components
U1 related factors
130654308
Complex B
130654308
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
130654308
NCBI-ProteinID:
XP_057312846
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All DBs
Position
8:19357132..19378826
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AA seq
874 aa
AA seq
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MAGNFSPMRPPGGAQGPPRPMFPGFQPGQPPALPTGMPPASMGGFFSQQQQNSMSMMPPG
GQMPPMFTGHMGAGPQMVGAPQMGGVPPGMPPNMPHMPFQPMPSAMNPPLPMGTMPGMPM
MPMGAPMMPPVAMQQPIMSHMGFVDKSSSKKKEKAEKKAEVKEKPKKKKRVKKPKKAWTE
HTAPDGRTYYFNAETKTSLWTKPDDLKTEVEKLLDACVWKEYKSDSGRAYYHNTETKESK
WTIPEELEELKKRLEEEKKVLAEKPESSSEEEVTDDGESEDEEKAGSDEGGEDDTVPKQA
QTIKREWTSKEEAKQAFKDLLREKNVPSQATWEQAMKLIVHDYRFEALQKLNEKKQVFNT
YKQQKANEEKEQHRERAKEDREKLRIYLEEHPRMHSHVRYRKACDMFESDKIWNAVPERE
RKDLFQDVLHYLAGREKEDEKKMHIYNKQYMYDIFSEIPGLSYRSLWSEAQDLIKDHPRY
KNNDKIQEIMIEDKEDALAAFADFIRELEKDYEEERIHEKNRVKRQHRKYREAFCTLLDE
LHKKSYINSMSRWMDLFPKISSDDRFTNMLGIPGSTPLDLFKFFVEDLKSRYSDEKKIIK
EILKDKQFAVDVRTPFEDYNSIVIGDHRSETLDPGNIKAAFNSMREKAESREKERAKKEE
RESRRKESSFRAILKQAAPPLENGDKWEDVRKRFEKEEAFQAVVLESERVRLYKEWMETY
KTRKKKEKKKHKKRSGSDSEEDEEVRESRSKKRKHRARSRSRSRTPSDIDESPEQEEKKK
KRKKKSKKKKQRSPSPSDGESEVESRKKKKKEKRREQSDESEDGETVSPPHKKGKKDRKK
EEWESSSESESELQSRRKELLRKLRASTSHADSD
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaattttagtcccatgcgtcctccaggcggggctcaaggaccacctcgacct
atgtttcctggtttccaacctggacaaccacctgcactgccgactggcatgcctcctgct
agcatgggtggattcttctctcaacagcaacagaattcaatgtcaatgatgcctccaggt
ggacaaatgcctccaatgttcacaggtcatatgggtgctggaccacaaatggttggagca
ccacaaatgggaggcgtacctcctggaatgcctccaaacatgccacatatgccgtttcaa
ccaatgccatctgcaatgaatcctccgttaccaatgggtacaatgccaggaatgcctatg
atgccaatgggtgccccaatgatgcctcctgtggcaatgcaacaaccaatcatgagtcac
atgggttttgttgacaaatcgagtagcaaaaagaaagaaaaggcagagaaaaaggcagaa
gtcaaggagaaaccgaaaaagaaaaagcgtgttaaaaagccaaagaaagcctggactgaa
catactgctcctgatggtcgtacatactacttcaatgcagaaactaaaacttcactatgg
actaaaccggatgatctcaagacagaagttgagaaacttcttgatgcatgtgtttggaaa
gaatataaaagtgattcaggaagagcttactatcacaacaccgaaactaaagaatcaaag
tggaccatacctgaagaattagaagaattaaaaaagcgactagaggaagaaaagaaagta
ttagcggaaaaacctgaatcttcgagcgaggaagaagtgactgatgatggggagagtgag
gatgaggagaaagctggctcagatgaaggaggtgaagatgacacagtaccaaaacaagca
caaactataaaaagagaatggacatccaaagaagaagctaaacaagcttttaaagatctc
cttcgagagaagaatgttcctagccaagccacttgggaacaagcgatgaaactgatagtg
catgattacagatttgaggccttgcaaaaacttaatgagaaaaaacaagtgtttaataca
tacaaacaacaaaaagctaacgaggaaaaagaacaacatagggaacgtgcaaaagaagac
cgtgaaaagttacgtatataccttgaagaacaccctcgcatgcattctcatgttagatat
agaaaagcatgtgatatgtttgaaagcgacaaaatttggaacgctgtgccagaaagagaa
cgcaaagacttatttcaagacgttctgcattatttagctggtcgagaaaaggaggacgaa
aagaaaatgcacatttataataagcagtatatgtatgatatattctctgaaataccgggt
ttgagttacagatctttgtggagcgaagcacaagatcttatcaaagaccacccacgttac
aaaaataatgataaaatacaagaaataatgatcgaagataaggaggatgcattggctgca
tttgctgatttcatcagagagcttgaaaaggattacgaagaagaacgtattcatgaaaaa
aatcgagtcaaacgtcagcatcggaaatacagagaagctttctgcactctacttgatgag
cttcataaaaaaagttatatcaactccatgtcacgctggatggatctgtttcctaaaata
agttctgacgaccgctttacaaatatgttgggaataccaggttctacgccactcgacctt
ttcaaattctttgtagaggatttgaagtcacgatacagcgacgaaaagaaaattataaaa
gaaatacttaaggacaaacagtttgctgtcgatgtccgtactcccttcgaagattacaat
agcatcgtaataggtgaccatcgctctgaaacgctagatcctggcaacataaaggctgca
tttaatagcatgcgcgaaaaagccgagtcccgcgaaaaagaacgagcaaagaaagaagaa
cgggagtcacgacgcaaagagagttcattccgtgccattttaaaacaagctgctccacct
ctggaaaatggtgacaagtgggaagatgttcgtaagcgttttgagaaagaagaagccttt
caagctgtcgttttggaatcagaacgagtccggttatataaagaatggatggaaacgtat
aaaacgagaaagaagaaagaaaagaaaaaacacaagaagagatctggctcggattcagag
gaagatgaagaagtgcgagagtctcgcagtaagaagaggaaacatagagccaggtctaga
tccagatcacgtacgccgtcagatatagatgaatcgccagaacaagaagaaaagaaaaag
aaaagaaagaagaagtcaaagaaaaaaaaacagagaagtccatctccatccgacggtgaa
tcagaagtagaaagccgaaagaaaaagaaaaaagaaaaacgaagagaacaatctgacgaa
tctgaagacggagagactgtctctcctccacataaaaaaggaaaaaaagacagaaaaaag
gaggagtgggagtcgtctagcgaaagcgaatctgaacttcaatctcgtcgtaaagaatta
ttacgaaagttaagagcgtcgacaagccacgctgattctgattag
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