Hydractinia symbiolongicarpus: 130654539
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Entry
130654539 CDS
T09218
Name
(RefSeq) nuclear pore complex protein Nup85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130654539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130654539
03036 Chromosome and associated proteins [BR:
hsy03036
]
130654539
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130654539
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130654539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
130654539
NCBI-ProteinID:
XP_057313132
LinkDB
All DBs
Position
8:2212707..2229278
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AA seq
631 aa
AA seq
DB search
MCDIHQNIAKWQGVNSLIVHYNMGGQAGDGILKELRWNVDIQNSVTRKLLNETHGIFLDL
QEACEDDGGEKEAWIKTSLEYRAVIQSCIIKLREKLKYQRERTVKESMENELNLLSFMEM
IWYLCEVLLVQSQSGSYCLQHLLEWVRCHFNEADILGQNVMSSDDPYSHQDYWPTVYGFV
LQGRLNEVCDLLMHHPDRDPRRFDAFANIEELLKKMPVFHVYQGQTMNDFNSKWQHWHSE
CASRLSDGDFLEYPQLQVLCELLCGGDAALLKQKDLFRSWYQLMTAKLLFADPTVKTFHL
KQYAVECMEMYNGIGKVTALDEIFLSIMAFDIHKIIEKCSATLPNWWFVAHLTDLLFHCG
LLRSSNLDYGEELREFIILEYSASLMSHSSLWSIAADYLMTCPVHGREHLEAYLEKISLD
SEAKALKVIHLCTKYGFTEQSNTVCKVMGMKALRRKRLGVALSWCLRAKDEVFVSFLTEK
FLNHYMETGTFAQCDLIENLGSSMLLNNKLTFLGKYHEFHKLYLSSQYRKAGALLVSLLT
SNLAPKKFWMILLIDSLPLLENKEIIFTSEQTYELMQCLKELQLCYNPDVTQKQNKTIEE
EEIAKVERLHFALTRNLGRALLVQSDHDVIR
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatatacatcaaaatatagcaaaatggcagggtgttaattcattgattgtgcat
tacaacatgggaggtcaagctggtgatggcatattgaaagagttacgttggaatgtagac
attcagaatagtgtgacgagaaaactgctcaatgaaacccatggaatcttcttagatcta
caggaagcatgtgaggatgatggtggtgagaaggaagcatggattaaaactagtctagaa
tatcgggctgtcattcagtcatgtattattaaactacgagagaagctgaagtatcaacga
gagaggactgtaaaggaaagcatggaaaatgaactaaatttgttaagctttatggaaatg
atttggtatttgtgtgaagttcttcttgtacagtcacaaagtggaagctattgtttacaa
catttgttggaatgggtgagatgtcatttcaatgaggcagatatacttgggcaaaatgtc
atgtcatcagatgatccgtattcacatcaagattactggccaactgtttatggctttgtg
ttacaaggtcgacttaatgaagtttgtgacttattaatgcatcatcctgatcgtgatcca
agaagatttgatgcatttgcaaatatcgaggaactattgaagaagatgcctgtttttcat
gtatatcaaggtcagacaatgaatgattttaattcaaaatggcagcattggcattcagaa
tgcgcatcacgattaagtgatggagattttttagaatatccacagttgcaagtgttgtgt
gagttgttatgtggtggagatgcagctcttctcaaacaaaaagacttatttcggtcttgg
tatcagctgatgactgccaaactattgtttgctgatcctacagtgaagacatttcatcta
aaacaatacgctgtggaatgtatggaaatgtacaatggtattggtaaagtgacggctttg
gatgaaatctttctttctattatggcgtttgatattcataagatcattgaaaagtgcagt
gcaactctacccaattggtggtttgttgcgcaccttactgatttgttattccattgtgga
ttgctaagaagttcaaatttagattatggcgaagaactcagagagttcataatattagaa
tatagcgcaagtttgatgtctcattcaagtttatggagcattgctgcggattatttgatg
acgtgtccagtacatggaagggaacatttggaagcttatttggagaagatctctttagat
agtgaagcaaaagcgttaaaagtgatccacttatgtacaaaatatggatttactgaacaa
agcaatacggtgtgtaaagtaatgggtatgaaagctctcaggaggaaaagattgggtgta
gccttgtcctggtgcttaagggcaaaagatgaagtctttgtttcgtttttaacagaaaaa
tttttaaaccactacatggaaacaggaactttcgctcagtgtgatctgatagagaacctt
ggttcttctatgttactgaacaataaacttacatttctaggaaaatatcacgaatttcat
aaactatatttatccagccagtacagaaaagctggtgcattgttggtgtctctgctaaca
tcaaatttagcgccaaaaaaattttggatgattctgttgattgattcacttccactacta
gaaaataaagaaattatatttaccagtgaacaaacgtacgaattgatgcaatgcttgaag
gagttgcagttatgttataatcctgatgtcacacaaaaacaaaataagacaattgaagaa
gaagaaattgcgaaagtagaacgacttcacttcgcgttaactcgcaatttaggacgggca
ttacttgtacagagtgatcatgacgtcatcagataa
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