Hydractinia symbiolongicarpus: 130654739
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Entry
130654739 CDS
T09218
Name
(RefSeq) uncharacterized protein LOC130654739
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130654739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130654739
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130654739
Enzymes [BR:
hsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130654739
Messenger RNA biogenesis [BR:
hsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
130654739
DNA repair and recombination proteins [BR:
hsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
130654739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
130654739
NCBI-ProteinID:
XP_057313372
LinkDB
All DBs
Position
1:15179936..15182027
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AA seq
285 aa
AA seq
DB search
MTRAEVAIINQTSDLPLQLQEEFGFTWSLFVINIPHQFKNVNTKKKVTNSSSTPAPFTVA
SKRRWHRLVTWASNEPDSGEGHHVIAVLPTGFGKSLIYQLLPDFVPERKAGNIVLVVSPL
TSIIQDQLVNLSKVGIECGILQLEDQANSQRYEPLFEEDLNDASNSVFKISKSIVAGKCK
ILFAHPESLLSDQGRKILRSKIYEENVVACVIDEAHCVELWGEEFRTEFQNLSVFQAFFP
HSIMLALTATASPTKLRNLKKALKIENCKVVTANPNRKSIFLKKK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacaagagcagaggttgctataataaaccaaacgtcagatcttcctttgcaacttcaa
gaagaatttggttttacatggtctttgtttgtgatcaatataccgcaccagtttaaaaat
gtaaatacaaagaaaaaggtgactaattcaagctcgaccccagcaccttttaccgtggcg
tcgaaaaggcgctggcacaggctggtcacgtgggcatcaaatgaaccagattctggagaa
ggacaccacgttatagctgttttgcctactgggtttggtaaatcgttaatttatcaactt
ttacccgactttgttccagaacgaaaggcaggcaatattgtacttgttgtctctccttta
acatcaattattcaagatcagttagtaaatttaagtaaagtaggcattgaatgtggtatc
ttacaactcgaagaccaagctaatagccagagatacgaacccttgtttgaggaagatttg
aatgatgcatcaaattctgtttttaaaatttcaaaaagcattgttgcaggcaaatgtaaa
attttatttgcacatccagagtctctgttatcagatcagggaaggaagatattacgatca
aaaatttatgaggaaaatgttgtggcttgtgtgatagacgaggcgcattgtgtggaatta
tggggtgaagaatttcgtacagaatttcaaaacttatcagtttttcaagcattcttccct
cacagtatcatgttagctttgactgcaactgcttcaccaacgaaattacgtaatttaaaa
aaagctttgaaaatagaaaattgcaaagtggttactgcaaatccaaatcgtaaaagcatt
tttttaaaaaagaaataa
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