Hydractinia symbiolongicarpus: 130654978
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Entry
130654978 CDS
T09218
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130654978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130654978
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
130654978
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
130654978
NCBI-ProteinID:
XP_057313662
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All DBs
Position
8:19407996..19409180
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AA seq
220 aa
AA seq
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MAVNTGAGWPQTTNTNTYNNAPVSLERTLYLYPLSNYTFGTKEALYEKDSSVQARFQRMR
DEYDTLGMRRNVEGCLIVHEHQLPHILLLQLGTTFFKLPGGELMPGEDDSEGLKRSMTEM
LGRPDMTEKINWQVEDVLSNWFRPNFETPIYPYIPAHITKPKEQKRIFLTQLPEKAVFAV
PRNYKLVAAPLFELFDNPQGYGPVIATLPSLLSKYNFIYM
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaatactggagctggttggcctcaaactactaacactaacacatacaacaac
gcacccgtttctttggagcgtacactttatctctatccattgagcaattatacgtttggg
accaaagaggcgctatacgaaaaagatagttctgttcaagcaagatttcaacgtatgcgt
gatgaatatgatacactgggtatgagaagaaatgtagagggttgcttgattgttcacgag
caccagcttccacatattttgcttcttcagcttggtacaacgttttttaagttgccaggt
ggagaacttatgcctggtgaagatgatagcgaaggcttgaaacgctcaatgacagaaatg
cttggacgaccagatatgactgaaaaaatcaattggcaggtagaagatgttttatcgaac
tggtttcggccaaattttgaaacaccaatctacccatacattcctgcacatattacaaag
ccaaaagagcagaagagaatatttctcactcaactcccagaaaaagctgtttttgctgta
ccacggaattacaaattagttgcagctcctttgtttgagctttttgataatcctcaaggg
tatgggccggttattgcaacactgccaagtttactgagtaaatataactttatatacatg
taa
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