Hydractinia symbiolongicarpus: 130655046
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Entry
130655046 CDS
T09218
Name
(RefSeq) very low-density lipoprotein receptor-like
KO
K20053
very low-density lipoprotein receptor
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130655046
Membrane trafficking [BR:
hsy04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
130655046
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
PARM
RIFIN
Glycophorin_A
DUF4690
Pox_EPC_I2-L1
Orf78
Syndecan
Motif
Other DBs
NCBI-GeneID:
130655046
NCBI-ProteinID:
XP_057313727
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Position
8:4174336..4179325
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AA seq
890 aa
AA seq
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MKILAGNLLAMFVLVLSLFFTQVTAKTVSETSFFCEEDKFKCSSQKCIPDKWKCDGDDDC
GDGSDEVNCHLATCKPNEFTCKNKKCIPKKWACDSEVDCSDGSDENNCPKPTCRPDSFHC
NNSRCVQKKWKCDGHDDCGDNSDEESCGDVISTCKSSEFKCGNGACIFKLWACDGEKDCQ
DGSDEENCKKLVSECDPSEFRCTTNHCIPNKWRCDGANDCHNGADERNCSLITTNKPVKV
CAAKFWQCQNGDCIKKEWKCDGENDCSDGSDEQACDQIHCHSTKASCKNGRQCIFSSHKC
NGFKDCDDGSDEENCGKPPINCGLNHFNCTDGSCINISEVCNLKRDCPHWEDEPANCFIN
ECLSNNAHCMHTCTDLKIGYKCSCKKGYELAADRKTCNDVNECKIYGSCHHSCTNTKGHF
KCACASGYVLGPDMKSCKALGVSSWVYFANRHDIRKMLPNVREYTVEVSNQSGVVSFDFD
INNKHIYWSDIKLKKIQRSVIDKHDSIETIVDHVHTPDGLAFDWIGGKLYWTDTGYKTIE
VSDLYGHHNADLVKVGLAEPRAIALNPHEGFLYWTDWGESAAIEKISMDGAEETRVKIVT
VNIVWPNGLSIDLAQKRIYWIDAKLKRIESTDFNGENRVLLREGGFSHPFALDAFEDMLY
WTDWKLDGVVRMSKFNTTITPVQLELYAPMDVKVWHPMKQMKEPNPCGANNYGCSHLCLL
ANHFGRRTVVCKCPRNMTLDKSKKKCKGIPVTRGPKSTATKKVLTTVTIQSTYKKVTKSK
STQTQKTSKKSSKLYTTASTTKVPVVNPQEHAPRTADLSSNMSTGTITAIVISVIIALII
LLFLVFYLKRRHVGKNHVMYYKDMSTMPLEEDFDVTPNDLNDKAKIITDY
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttggcgggaaatttgttggctatgtttgttttggtgttgtcattatttttc
actcaagtcacggctaaaacagtatcggaaacttcatttttctgcgaagaagataagttt
aaatgctcttctcaaaagtgcattcctgacaagtggaaatgtgatggcgatgacgattgt
ggtgacggaagtgacgaagtcaattgccatctcgctacctgcaagccgaatgagtttaca
tgcaagaataaaaaatgcataccgaagaaatgggcgtgtgatagtgaggtggattgctcg
gacggttcggacgaaaataattgcccaaaaccaacctgcagaccagattcctttcactgt
aataactcaagatgtgttcaaaaaaagtggaaatgtgacggccatgatgactgtggtgat
aattcagacgaagaatcttgtggagacgtcatatcgacgtgtaaaagtagcgagtttaag
tgtggtaacggcgcctgcatttttaaactctgggcttgtgacggagagaaagattgtcaa
gatggatcggacgaagaaaattgcaaaaaactcgtttcggaatgtgatcccagtgaattt
cgctgcactaccaatcattgtataccaaacaagtggagatgtgacggtgcgaacgactgc
cataacggtgctgacgaaaggaactgttcgttgataacaaccaataagccggtaaaggtt
tgtgcggctaagttttggcagtgccagaatggagattgcatcaagaaggaatggaaatgc
gatggagaaaatgattgttcagatggaagtgacgaacaagcttgtgatcagatacattgt
cattcaacaaaagccagttgcaaaaatggacgtcaatgtattttttccagtcacaaatgt
aatggtttcaaagattgtgatgatggatcagacgaagaaaattgtggaaaaccaccaatc
aattgtggtttaaatcatttcaactgtacagatggtagttgcataaatatatctgaagtt
tgtaaccttaaaagggattgtccacattgggaagacgaacccgctaactgtttcatcaac
gaatgtttaagcaacaatgctcactgcatgcatacttgtactgacctcaaaataggatac
aaatgttcctgcaagaaaggctacgagctagctgctgatagaaaaacttgtaatgacgtt
aacgaatgcaaaatttacggttcctgtcaccactcatgcacaaacacaaaaggtcatttt
aagtgcgcttgcgccagtggctatgtgttaggaccagatatgaaatcgtgtaaagctttg
ggtgtaagcagttgggtgtattttgctaatcgtcacgacatcagaaagatgctccctaat
gttagagagtacacggttgaagtttcgaaccagagtggggtagttagctttgactttgat
atcaacaacaaacacatctattggagcgatataaaattaaaaaaaattcaacggtcggtg
atcgacaaacatgattcaattgaaacaatcgttgaccatgttcacacgcctgatgggtta
gcttttgattggattggtggaaaactttactggacagacacaggttataaaactatagag
gtttctgatctttacggtcatcataatgctgatcttgtaaaagttggattagctgaacca
agagccattgctttaaacccacatgagggattcttgtattggaccgactggggagaatca
gctgcaattgagaagatttcgatggatggagctgaagaaactcgtgttaagatcgttaca
gtaaatatagtatggcctaatggtttgtctattgacttggcacagaaaagaatatactgg
atcgatgcaaaactgaaacgaattgaatcaacagactttaatggtgaaaacagagttttg
ctgcgagaaggaggattttcgcatccctttgcacttgatgcttttgaagacatgttatat
tggactgattggaagctagatggtgttgtcagaatgtcgaagtttaacacaaccattacc
cctgttcagttagaactgtatgcgcccatggacgtgaaggtgtggcaccccatgaagcaa
atgaaagagcccaatccttgtggtgcaaataattatggctgtagtcacctatgtttgctt
gcaaatcatttcggtcgccgtacagttgtttgcaaatgtccacgaaatatgacgcttgac
aaatcaaagaagaagtgtaaaggaattcctgtaactagaggacccaaatctactgctact
aagaaggttctaaccaccgtgactatacagtcaacttacaagaaagtgacaaagtcaaaa
tctactcaaacacaaaaaacttcaaagaaatcaagtaaactctatacaactgcaagtaca
acaaaagttccagtggttaacccacaagaacacgccccaagaacagcagatctatcatcc
aatatgagcacaggtactatcactgcaatcgtcatctccgtcatcattgccttgattatt
ctcttgtttctcgttttctacttgaaacgacgtcacgttggtaaaaatcacgttatgtat
tacaaagacatgtcaacaatgccgttagaagaagactttgatgtaactcctaacgatcta
aacgataaagcgaagattataacggattattag
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