KEGG   Hydractinia symbiolongicarpus: 130655329
Entry
130655329         CDS       T09218                                 
Name
(RefSeq) nucleoporin p54-like isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
hsy  Hydractinia symbiolongicarpus
Pathway
hsy03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hsy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130655329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsy03019]
    130655329
Messenger RNA biogenesis [BR:hsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     130655329
SSDB
Motif
Pfam: Nup54 Nup54_C PCDH15_12th DUF6061
Other DBs
NCBI-GeneID: 130655329
NCBI-ProteinID: XP_057314054
LinkDB
Position
8:24300604..24312762
AA seq 537 aa
MAFSLGGNLGAATSTPAFSFGAAKTTAPALFGGLGSNTTAGFGQSSGTTTFGTTTTTASA
LFGGLGAQSTTSTGFGGFTGFGAKTTSSGFGGFGFGTTTTSAGTGFGSTSLIPGFGAKST
ATGFGLTTTQPTWSMGQQSTQQQQQVVENPLAIMTSALTMPTLFGDERDSIIAKLNQLQA
LWGQGKAYYANAPPIPFGPENPFSRFKSIGYSCLPTAKDSDGFVSLDLKHKEGYIKENQQ
QLVEALHKCLGSKPTLSVCVDGVRSLPSDRSEVVIYVVERQTNGSTRRILATELYAFLSQ
DNIKNQLKTMGVENLVAKTTFTESQLKQFLDTPPLCIDAILWEQAKKDNPDPATLIPVPM
LGFNELLTRLKHQQYQNTQHERRLDLISEEIDTLQKSHSTTIAKLAQYKRKHLELGHRVL
EVMINLESSRKIGYAIEPSEEQLRIQLESLQAELNAPMQFKGRLNELMSQIRLQSQINNR
QSSSAYSLDEHIKVEIKQHLTQQQNGLLQLISIIKDDFEDLKIIENGVMDSIYQPRR
NT seq 1614 nt   +upstreamnt  +downstreamnt
atggcgttttcgctaggaggaaaccttggggctgccacatccactcctgcatttagcttt
ggggctgcaaaaacaactgctccagcactgtttgggggactcggatctaacacaactgca
ggatttggacagtcaagtggaacaacaacttttggtaccacaacaactacagcaagtgca
ttatttggtggacttggagcacaaagtacaacttcaactggttttggaggctttactgga
tttggtgcaaaaaccacttcatctgggtttggtggattcggttttggaacaacaacgacc
tctgctggcactggttttggttctaccagtttaattccaggttttggtgcaaaatcgact
gctactggttttggtttgacaacaacacaaccaacatggtcaatggggcagcagtcaacg
caacagcaacaacaagttgtcgaaaatcccttggctataatgacaagtgccttgacaatg
ccaactttgtttggtgatgaaagagattccattattgcaaaattaaaccaactgcaagca
ctatggggtcaaggaaaagcttactatgctaatgcgccaccaataccttttggtccagaa
aaccctttctctagattcaaatcaattggctatagctgtttacctacagccaaggacagt
gatggctttgtgtcacttgatctgaaacacaaagaaggttacataaaagaaaatcaacaa
caactcgttgaagccctacataaatgtcttggaagtaaaccaacattatctgtgtgtgta
gatggcgtcagaagcttgcccagtgacaggtctgaagttgttatttatgttgttgaaaga
caaacaaatggctccacgcgaagaattttagccactgaactctatgcatttcttagtcag
gataacatcaagaatcagttaaaaacaatgggtgttgaaaacttggtagcaaagacaact
tttacagaatcacaattaaagcagtttcttgatactcctcctctatgtattgatgcaatt
ttatgggagcaagcgaaaaaagataatcctgatcctgcaactttaataccagtgcctatg
ttgggcttcaatgaattgttaactcgtttgaaacaccagcaatatcaaaatactcagcat
gaacgaagacttgacttaatttctgaagaaatcgatacactccagaaatcgcattcgacg
actattgcgaaattggcacaatataaacgtaaacatcttgaactgggtcatagagtgctg
gaggtaatgatcaatttagaaagttcgcgaaaaatcggatatgcaattgagccatctgaa
gagcaactaagaattcaactagagtctctacaagcagaactcaatgcgccaatgcaattt
aaggggcgtttgaatgaactgatgtcgcagatacgtttacaatcacagattaataacaga
cagagcagttcagcgtactctttagatgaacatatcaaagtagaaattaaacagcatctc
acgcagcaacaaaacggccttctacaactcatatcaataataaaagacgatttcgaagac
ttaaaaatcattgaaaatggcgttatggacagcatataccaaccacgtcgatga

DBGET integrated database retrieval system