Hydractinia symbiolongicarpus: 130655447
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Entry
130655447 CDS
T09218
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130655447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsy03021
]
130655447
Enzymes [BR:
hsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130655447
Transcription machinery [BR:
hsy03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
130655447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
130655447
NCBI-ProteinID:
XP_057314186
LinkDB
All DBs
Position
8:21433292..21445951
Genome browser
AA seq
1393 aa
AA seq
DB search
MVKEQFREAAVGKKISSINFGVFSADQIQQLATVQCVAKSLYTPDATRTPVPYGVLDKKL
GTSGKDKVCDTCGKNLVECVGHFGFIDLELPVFHIGYFRSTISILQQICKTCSRVIIPDA
VKETFIISLRRVGITTLQRKNIHKKILEKCKKTSTCPYCLDKNGTVKKLSMMKIVHEKYK
NTKKQEDPLITDFKNSFQAATESNKELGSLVNKAQELLNPLKVLQLFENVPNEDCPLLGM
LPQTGRPEDLIMTRIAVPPACIRPSVLSELQSGSNEDDVTMKLTEIIFLNDVIRKHQSTG
AKVQIIMEDWDFLQLQCALYINSEMSGIPMNMQPKKATRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDQVAVPIHVAKILTYPERVTKENIKFMRQLVVNGPDTHPGANF
VENKSTGMKRFLRYGNRSNVANQLKHGDVVERHLLDNDIVLFNRQPSLHKLSIMAHYATV
RPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALTLMGVKSNLITPKNGEPIIA
ATQDFITGGYLVTQKDLFFTRPQFCQITSMILAGKDVTMKIDLPPPAIVKPIALWTGKQV
VSVMLRPNKSSPVKINLRTKGKSYTSNEELCINDSYIVVQNSELLAGALDKSVIGSGSKS
SIFYILLRDYGEQAAADGMWRLARVAPWFLSNRGFSIGIGDVTPGPGLIKAKEKLLAEGY
AKCDKFIEDYSNGMLQTQPGCSAEETLEAIILRELSVIREHCGKACWQELHRSNSPLTMA
VCGSKGSFINISQMIACVGQQAISGHRTPDGFEGRSLPHFRKHSKIPAAKGFVANSFFSG
ITPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLSLQYDYTVRSSMGDIVQFI
YGEDGLDPACMEGKDKPIDVERIFQHCKNLDPGLTESSLNGNQIGEVVEHIIKVSADISR
CGDLLSDELKDFFNKLSQKVSSYIKKLNKEQLSRVRVINPSLHVTKSLLEHTISICVQKY
LRAKCEPGTAVGALCAQSIGEPGTQMTLKTFHFAGVATMNITLGVPRIKEIINASKAIST
PIVSAPLQNDTDIEYARRVKGRVEKTTLGEVCEYIEEVFTPDDCYLLIKIDINRIRLLKL
EVDASSIKYALCIAPKLKIKPQRVSIHGKSLLTVHPQETTKSSMYYVMQMLKGALPAVLI
KGFPTVSRAIIHVDEENKKNGGKERFKLLVEGDDLRAVMATRGVRGTGCTSNNTIEVEKT
LGIEAARVTIMHEITYTMKSHGMSIDSRHVMLLADLMTFRGEVLGITRHGLAKMKESVLM
LASFERTADHLFDASFFGKRDAINGVSECIIMGIPMNLGTGMFKLLQRHAEEVEVRTRPL
VFDTPEFHLAEMT
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagaacaatttagagaagctgctgtggggaaaaaaatatctagcatcaatttt
ggggtattttctgcagatcagatacagcaattagcaactgtacaatgtgtggcaaaatct
ttatatacacctgatgctactcgaacacctgtaccctacggtgttctcgataaaaaactg
ggtacaagtggaaaggataaagtatgtgatacttgcgggaaaaatctcgtggagtgtgtt
ggccattttggtttcattgatcttgaattgccagtatttcatattgggtactttcgttca
acaatttcaattctccagcaaatatgcaaaacttgcagtagagttataattccagacgca
gtcaaggaaacattcataatttctttacgaagagttggaattacaacattacaacgtaaa
aatatccacaaaaagattttggagaaatgtaaaaagacttccacatgtccatactgcctt
gataaaaatggaactgtaaagaagttaagtatgatgaagattgttcatgaaaaatataaa
aatacaaaaaaacaggaagatccattaataacagatttcaagaactcatttcaggcagcc
acagaaagtaataaagagcttggtagtcttgttaataaagcgcaggagttactaaaccct
cttaaagtacttcagttatttgaaaatgttcccaatgaggactgccctttactgggtatg
ctcccacaaactggtcgaccagaagatttaattatgacacgtatcgctgtgccgccagca
tgcatcagaccttcagttttatcggaattacaatctggaagtaatgaagatgatgtcaca
atgaaattaacagaaataatatttctaaatgatgttattcgcaaacatcagtccactggc
gccaaagtgcaaatcatcatggaagattgggattttttgcaactacaatgtgcattgtat
atcaatagcgaaatgtctggtattccaatgaacatgcaacctaaaaaagctactagagga
tttgttcagagattgaagggaaaacagggtcgatttcgtggaaatttatcaggaaaacgt
gtagatttttctggaagaacagtcatatcacctgacccaaatttaagaattgatcaggtt
gctgtccctatacacgtagcaaagattttaacatatcctgaaagagttacgaaagaaaac
ataaaatttatgcgacagcttgtagttaatggacctgacacacatcctggtgcaaatttt
gttgagaataaatctacagggatgaaaagatttttgagatatggtaatcgttcgaatgtt
gcaaaccaactcaaacatggagatgtcgttgaaaggcacttgcttgataatgacattgtg
ctgtttaaccgtcaaccatcattgcataaattaagtataatggcgcattatgcaacagta
cgcccacatcgtacttttcgattcaatgaatgtgtctgcacaccttataatgcagatttt
gatggagatgaaatgaacttgcatcttccacaaacagaagaagctaaagccgaagctctt
accttaatgggtgttaaatcaaatttgattactcctaaaaatggcgaaccaattattgct
gccactcaagattttataactggtggatatttggtgacgcaaaaagatctattcttcacc
cgaccacagttttgtcaaattacatcgatgatattagcagggaaagatgttacaatgaaa
attgatcttcctccacctgctattgtgaagccaattgctttgtggactggaaaacaagtt
gtcagtgtcatgcttcgtcccaataaatcctcccccgtaaagatcaatttgagaacaaaa
gggaagtcttacactagcaacgaagaattgtgcataaacgattcctacattgtggtccaa
aatagtgaattgttggctggagctttggataaaagtgtaattggttcgggatcgaagagt
agcatattttacattttgttgcgagattacggggaacaggctgctgctgatgggatgtgg
aggctagcaagagtggcaccatggtttttgagtaatcgtggtttttccattggtatcggt
gatgtcacacctggccctgggttgataaaagcaaaagaaaaattgttagcagaaggctac
gcgaagtgtgataaattcattgaggattattcaaacggaatgttgcaaacacagccaggc
tgttcagcggaagaaacattagaggctattatcctgagagagctttccgttattcgtgaa
cattgtggtaaagcctgctggcaagaattacatcgtagtaacagtccattaactatggcg
gtttgtggttctaaaggttctttcatcaacatatcacaaatgatagcgtgcgtgggtcaa
caagctatatctggtcatcgtacccctgatggatttgaaggaaggtcattacctcacttc
agaaaacattctaaaatcccagctgctaaaggttttgttgcaaacagttttttctctggt
ataactccaacggagtttttctttcacacgatggctggtagagaaggtttagttgatact
gctgtcaaaactgcagaaactggttacatgcagagaagattagtaaagtctctcgaagat
ctttcgttgcaatacgattacacagtgcgctcctccatgggtgatattgtgcagtttata
tatggcgaagatggacttgatccagcttgcatggaaggcaaagataaaccaattgatgtt
gagagaatatttcaacattgcaagaatttagaccccggtctcactgaatcatctctaaat
ggcaatcagattggagaagttgtagaacatattataaaagtatctgctgatatttcccgt
tgtggagatttattgtcggatgaactcaaagatttctttaacaagctctcgcagaaagta
tcatcctacataaaaaagctgaataaagagcaactttctcgagttagagtcataaatcct
tctctgcacgtgacgaagtctcttttggaacataccatatctatttgtgtgcagaaatat
ttaagagcgaaatgtgagccagggactgctgttggagcactgtgcgcgcaaagtattggt
gaacctggtacacagatgacgctgaaaacgtttcattttgctggtgttgcaacaatgaat
attacgcttggtgttcctcgcattaaggaaattatcaatgcatctaaagctatcagtaca
ccaattgtatctgcgcctttacaaaacgatacagatatcgagtatgcgagacgagttaaa
ggtcgtgtcgaaaaaacaacactgggagaagtgtgtgagtacatagaagaagtatttact
ccggatgattgctacctcttgataaagattgatatcaacagaattcgtttgttgaagtta
gaagttgatgcatcctctattaaatatgcgttatgtattgcaccaaagctgaagataaaa
ccacagcgtgtctcgatccatggcaaatctttgctaacagtgcacccacaagaaacaact
aaaagctccatgtattacgtcatgcagatgttgaaaggtgctttacctgctgttctgata
aagggttttccgacagtcagtcgagcaattatacatgttgatgaggagaataaaaaaaat
ggtggaaaagaaaggtttaagttacttgtggaaggagacgatttgagagctgtcatggct
acacgaggtgtacgagggactggctgcacgtctaacaacacaatcgaagtagaaaagacg
cttggtattgaagcggcaagggtgacgattatgcacgaaattacgtacacaatgaaaagt
catggtatgagtattgacagcagacatgtcatgttacttgctgacttgatgacattcagg
ggtgaagtgctgggaataactcgacatggactagctaaaatgaaagaaagtgttctgatg
ttagcttcatttgaacgaacagctgatcatttattcgatgcttcgttttttggaaaacga
gacgccattaacggtgttagtgaatgtattataatggggattccaatgaaccttggtaca
ggaatgtttaagcttttacaaaggcatgctgaagaagtagaagtccgaacacgtcctctc
gttttcgacactccggagtttcacctggcagaaatgacgtga
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