Hydractinia symbiolongicarpus: 130655969
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Entry
130655969 CDS
T09218
Name
(RefSeq) vacuolar protein-sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130655969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130655969
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsy04147
]
130655969
Membrane trafficking [BR:
hsy04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
130655969
Exosome [BR:
hsy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130655969
Exosomal proteins of colorectal cancer cells
130655969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
BAR_3
BBL5
Motif
Other DBs
NCBI-GeneID:
130655969
NCBI-ProteinID:
XP_057314779
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All DBs
Position
8:7991426..7996912
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AA seq
387 aa
AA seq
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MDRFYWFNGQCDVNERQLHHQLSVRLYDGDEKTTFDSGLVNLTNLKLIWKDEEQKDRVIA
INLDLIKKIEFEGSSMFKSAKITLHLQQAPPDKPSGPKRASSHNYIRLSFRVGGQEAFGK
ALQNALSQKDWEKIAAAACAPSQPQAPQISHRHVGIGGIERKMQEKYKKTDESINQAFKD
LDALIDKAKDMVVLAEKFSSKLQDKKISITDDETVAFKSYLLSMGIDNPVTRDTHGSGVR
YHEELAKQLASFLNNIIEDEGGVMTLTDVYCRFNRARGMELISPDDVYNAAKMFEGLRLP
MRLRKFDSGVLVIQSLAHTEEEIISKTTKKVIEEGSLTAEELGGILGLAFTLAKERLLLS
EKFGKLCRDDSVEGLRFYPNKFLDAGV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggatcgattctattggtttaatggacaatgtgatgttaatgaacgccagttgcatcac
cagttgagtgttcgtttatatgatggtgatgaaaagacaacttttgattctggattagtc
aatttgacaaacctgaagttaatttggaaagacgaggaacaaaaggacagagtaattgca
ataaacttagatctgataaaaaagattgaatttgagggctctagtatgttcaaaagcgcc
aaaatcactctgcacttacaacaagcaccaccagataaaccgagtggaccaaaacgagca
agttctcacaattacattagactttccttcagagttggtgggcaagaagcgtttggaaaa
gctcttcaaaatgcactttcacaaaaagattgggaaaaaattgctgctgctgcttgtgca
ccttctcaaccacaagctcctcagatatcccatcggcatgttggtattggtggtattgag
cgaaaaatgcaagaaaaatataaaaagactgatgaaagtatcaatcaagcattcaaagat
ttagatgcgcttatcgacaaggcaaaagatatggttgttctggctgaaaagttttcttca
aagttgcaagataaaaagatttcaattacagacgatgagactgtcgccttcaaatcgtat
ttacttagtatgggtattgacaatccagtaacaagggatacgcatggttctggtgtaaga
tatcacgaagagttagcaaagcaattagcctcgtttctaaataatataattgaggatgaa
ggtggcgtgatgactttaactgacgtttattgtcgattcaaccgtgctcgtggaatggag
ctgatatctccagacgacgtttacaacgcagcgaaaatgtttgaaggtctcaggttacct
atgagactgcgaaaatttgacagtggtgtgttagtaatacaatcgttggcgcatacagag
gaagaaattataagtaaaacaacgaaaaaggttatcgaagagggatctctcacagcggaa
gaactaggtggaatcctcggattagctttcacactagcaaaagaaaggttattgctatcg
gaaaaattcggtaagctttgtcgagacgattctgtggaaggacttcgattttatccgaat
aaatttctggacgctggtgtctga
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