Hydractinia symbiolongicarpus: 130655994
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Entry
130655994 CDS
T09218
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34-like
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsy03016
]
130655994
Enzymes [BR:
hsy01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
130655994
Transfer RNA biogenesis [BR:
hsy03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
130655994
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
130655994
NCBI-ProteinID:
XP_057314811
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All DBs
Position
8:complement(19231247..19232751)
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AA seq
333 aa
AA seq
DB search
MNLQNQSQKEDLILITEISGKYFVWNADHVYNLRTQHRICGALIGSLPRKPWQTNITSLP
LILLPEEVHLCCTMGIAKIATAENYFERKQDRFVDAVQFHKQREENERDQIRLFKFEKMK
KEKVFYGFSKKTRRKETRTLQMQHNDESDTTTNDGNNEIKNTISETSKILNNARSIENAT
SFNTQSDNNSEDDWTSITLSDQDLVYYQQAVRVHIPTCAANVNQIAQHEFNYPRTWREKA
CYSVFKDFWTKGYYVTSASKFGGDYLVYPGDPLRYHSFYIVLVMDTDRHLTSKETICYGR
LAASVKKTVVLATVNSDCSSVSFVSLSWTHMKT
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcaaaatcaatcacaaaaagaggacttgattttaataacagaaatctctgga
aaatactttgtttggaatgcagaccatgtgtacaatttacgaacccaacataggatatgt
ggtgcattgattggttcattacctcgaaaaccatggcaaaccaacattacttctttgcca
ttaattttattacccgaagaagtgcatttatgttgcacgatgggaattgcaaaaatcgct
acagcagaaaattattttgaaaggaaacaggacaggtttgttgatgcagtgcaatttcac
aaacaacgcgaagaaaacgaaagagatcagattagattgtttaaatttgagaaaatgaaa
aaagaaaaagtgttttatggatttagtaaaaaaacgagaagaaaagaaacaaggacacta
caaatgcagcacaatgatgaatcagacactactacaaatgatggtaataacgaaataaaa
aacacaatttcggagactagtaaaattttaaataatgcacgttctatagaaaatgccaca
agttttaatacacaatcagacaataattctgaagatgactggacctctattactttatct
gatcaggatttagtttattaccagcaagcagttcgtgtgcatataccaacgtgtgctgca
aatgtaaatcaaattgctcaacacgaatttaattatcctcgaacatggcgcgaaaaagcg
tgctatagcgtttttaaagatttctggacgaaaggttattatgtcacttctgcttccaaa
tttggtggagactaccttgtctacccaggcgatccacttaggtaccattctttttatata
gtacttgttatggacacagacaggcatttaacttcaaaagagacaatttgttatgggcgc
ttagcagcatctgtaaagaagactgttgtcttggcaacggtaaacagcgactgttcttct
gtgtcgtttgtatctttaagttggacccacatgaagacttaa
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