Hydractinia symbiolongicarpus: 130656173
Help
Entry
130656173 CDS
T09218
Name
(RefSeq) papilin-like
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130656173
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsy04990
]
130656173
Domain-containing proteins not elsewhere classified [BR:
hsy04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
130656173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
TSP1_CCN
I-set
TSP1_spondin
Ig_3
ADAMTS_spacer1
Ig_2
ADAMTS_CR_3
ig
PLAC
Motif
Other DBs
NCBI-GeneID:
130656173
NCBI-ProteinID:
XP_057314984
LinkDB
All DBs
Position
9:complement(22429146..22441289)
Genome browser
AA seq
924 aa
AA seq
DB search
MAILQRFLAVTGVVGLFSIVAAQNNTTQLLAYWGEWGNWSDCSRTCGGGITAQHRECLTL
NNETVANCVGESAKYEMCNIQDCPDDAVDFRTVQCSQYDKKIHKGKYYKWVGFRHDAGEC
ELKCMPKNKFFYVTFQDKVTDGTRCNEHTFDVCVNGTCLPVGCDMQLYSNARIDNCGICN
GDNSTCKLIQGEFKLPKSSYGYVDITTIPSGATNIKIRENGVPTNYIALLSNGKSILNGD
YIFVHSRTTKHDGSTLVYERTRKNNHLTIDGPIDLSLKLDLYAMKPSDNLITYEYYVPTT
YKGVVNKVAEYNWVVEAWSECSKKCATGKRIRTAYCAKKNTQEKVKDFNCKKEQKPHTEE
ECNTQACPPRWYISQWSPCSKTCGVGIHTRRVHCVETIKDGNIRMLDFGDCPGSAPITVD
QCVVQQNCPQWLEMKWTQCSKTCGEGVQTRKIHCMDTVKENSVEEKQCSIERKPIAKRSC
FNAPCGATWEAEKWSECNSQCGSGIRSRTVICRNSEGIEVPAEYCNKNEEPTSFEQCQVL
GPCKPTWHATEWSKCTARCGYGMQMRMTVCAVMAPHDKKLTIVNESSCVVEKKPINMRRC
LNKKPCHTNYFVSKWSQCSQSCGMGFQIRKVQCYGDREIDYTEKVCKKLQRPTAVRLCKI
TSCGEVAGVGQLEATTTSTTTTTTTTVASTTTTRREYAARIVSLVGNVLLHEKDNEDYDC
IATGDPKPDIKWTLHGDEIKSTRFRTVEINGGSRLVILAASIEDVGELNCIATNRNGGDS
KSLDIKVTGPPVVTISPKFAEKIEGEGLVIRCSADGSPGPRTQWMRDAYNFYGDGNRVIV
GKDRITFKRLLVGDTGKYRCLAFNSAGTTEGSSNVVVKRSSDRTTKGECFDDNGKADCQL
ILKFGGLCDLPYYRGVCCASCTRK
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcgatacttcaaaggtttcttgccgtaacaggggttgttggattgttctccatcgtt
gctgctcagaacaatactacgcagcttctggcgtattggggagaatggggtaattggtca
gattgttctcgtacatgtggtggaggcataacagctcagcacagagaatgtttgacatta
aacaacgaaacagtggcgaactgcgtaggagagagtgctaaatatgaaatgtgtaatata
caagactgtccagacgatgcagttgattttcgcacagtgcaatgctctcaatatgacaaa
aaaatacacaaaggaaaatactataagtgggttggatttagacacgacgcaggagagtgc
gaattaaagtgcatgccgaaaaacaagttcttttacgtcacatttcaagacaaagtaacg
gatggtacgcgatgtaacgagcatacgtttgatgtctgtgtcaacggtacatgtttacca
gtaggatgtgacatgcagttgtactccaatgcacgtattgataactgcggtatttgtaac
ggagataactcgacatgtaaactcatccaaggtgaatttaaactaccaaagagttcatac
ggttacgttgatataacaaccataccgagcggtgctacaaatatcaaaattcgtgaaaat
ggagtaccaacaaattatattgcgcttctaagcaatggtaaaagtattctaaacggtgat
tacatattcgtccattctcgcacgacaaaacacgatggaagtacgctagtatacgaacga
acacgaaaaaataatcatctaacaatcgatggaccaattgatctttccctcaagcttgat
ttatacgctatgaagccttccgataacttgataacctacgaatattatgtgccaacaaca
tataaaggagtggtcaacaaagttgctgagtataactgggtggtcgaggcatggagcgag
tgcagtaaaaaatgcgccacaggaaaacgcattcggactgcatattgtgctaagaaaaac
actcaagagaaagtaaaagatttcaactgtaagaaagaacaaaaaccacacacagaagaa
gagtgcaacacacaggcatgtccaccaaggtggtatattagtcaatggagtccgtgctct
aaaacgtgcggagttggcattcatacccgacgtgttcattgtgttgaaactattaaagat
ggaaatattcgcatgttggatttcggagattgtccaggttctgcgcccatcaccgtggac
cagtgtgtcgtacaacaaaactgtccacaatggttagaaatgaaatggacacaatgctca
aaaacctgcggcgaaggagtgcagacaagaaaaattcactgtatggacaccgtgaaggaa
aattctgtggaagaaaagcaatgctcgattgaaagaaaacccatcgcaaaaagatcgtgt
tttaatgcaccatgtggagcgacatgggaggcggagaaatggagtgaatgcaactctcag
tgcggatctggtatacgcagtcgtactgtcatctgtcgcaatagtgaaggtattgaggtt
cctgctgaatattgtaacaagaatgaagaacctacatcattcgaacaatgtcaggtgtta
ggaccttgtaaacccacgtggcatgccaccgaatggagtaagtgtacggctcgatgtgga
tatggcatgcaaatgagaatgacagtttgtgcggttatggcgcctcatgacaagaaattg
actattgttaatgaaagtagttgtgttgttgaaaagaagccaattaatatgcgaagatgc
ttgaacaagaagccgtgtcacacgaattattttgtttctaaatggtctcagtgttctcaa
tcctgtggaatgggtttccaaattcgaaaggtccaatgttatggtgacagagaaattgat
tacacagagaaagtttgtaagaagcttcaacgacctaccgctgtcagattgtgcaagatt
acgtcatgtggagaagtcgcaggcgttggtcagctagaagctacaactacttcaacaaca
acgacaactacaacaactgtagcaagtacgaccacgactcgaagggaatatgcagctaga
attgtatctttagttggaaatgttctcttgcacgaaaaggacaacgaagattacgattgc
atagcaacaggtgatccaaaacctgacatcaaatggacattacatggagatgagattaaa
agcacaagatttcgtacggtggagatcaatggtgggagtagattagttattctcgcagcc
agcattgaagacgtgggagagctgaactgtatagctactaacagaaatggaggggattct
aaaagtttggacataaaagtcacaggaccaccggttgtcaccatcagcccgaaatttgcc
gagaagattgagggagaagggctagttatccgttgttcagctgatgggtcacccggtcct
cgaacccaatggatgcgagacgcctataacttttacggtgatggaaaccgagtcattgtc
ggaaaggatcgaattacattcaagcgattgcttgttggagacacagggaaatatagatgc
ttagcatttaattctgctggtaccacggaggggtcatctaatgtagtagtaaaaaggagt
tcggatcgaacaacaaagggggagtgtttcgacgataatggaaaagctgattgtcagctg
atattaaagtttggaggtttatgtgaccttccatactatcgaggcgtttgttgcgctagt
tgtactagaaagtga
DBGET
integrated database retrieval system