KEGG   Hydractinia symbiolongicarpus: 130656641
Entry
130656641         CDS       T09218                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
hsy  Hydractinia symbiolongicarpus
Pathway
hsy03020  RNA polymerase
hsy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130656641
  09124 Replication and repair
   03420 Nucleotide excision repair
    130656641
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsy03021]
    130656641
   03400 DNA repair and recombination proteins [BR:hsy03400]
    130656641
Transcription machinery [BR:hsy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     130656641
DNA repair and recombination proteins [BR:hsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130656641
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_recom Ogr_Delta
Other DBs
NCBI-GeneID: 130656641
NCBI-ProteinID: XP_057315528
LinkDB
Position
9:complement(15502865..15504350)
AA seq 138 aa
MMMLEDDDDDVEEIQPETSQRGPGFVGIKFCQECNNMLYPKEDKERKILKYSCRNCEYQE
RSKNSCIYVNMIVHDVNEMTQIVADVVADPTLPRTNDHPCPKCNQTEAVFFQSQSRKADH
MRLYYVCCAPECNHKWSE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgatgatgcttgaagatgatgatgacgatgtcgaagaaattcaaccggaaacaagtcag
cgaggacctggttttgtgggaataaagttttgtcaagaatgcaacaacatgttgtatccc
aaagaagacaaagaaagaaaaatcttaaaatattcgtgtcgtaactgcgaatatcaagag
cgatcgaaaaactcgtgtatatatgtcaatatgatagttcatgatgtcaatgagatgaca
caaattgttgcagacgtggttgctgatccaaccttaccaagaacaaacgatcatccatgt
ccaaaatgtaatcaaaccgaggctgtcttttttcaatcgcaatccagaaaagcagatcac
atgagactctattacgtatgctgcgcacctgaatgcaaccacaaatggtctgaataa

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