Hydractinia symbiolongicarpus: 130657154
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Entry
130657154 CDS
T09218
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130657154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130657154
Membrane trafficking [BR:
hsy04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130657154
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
130657154
NCBI-ProteinID:
XP_057316102
LinkDB
All DBs
Position
9:13002066..13012493
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AA seq
856 aa
AA seq
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MSLKAFDLVPVVDKVNLSGDRTKSSIECLELVQENLYIGTTDCFLIHYAIEQGISPTGKT
TFMNKLQRHKHLGLRKPIKQLLACAAVGQLLVLCDGNVYSVSMYGLEIRIGANKEMFKGV
TVMARNNKPPVFNPDEVQICIGTKRKTVQIYTLTTNGCMMLKEINLTDPPNVLAIDSQTI
CTTLGHQYFLIDYVTSVVQELFMYEAHNVLPMVKRIGHEEFLLNGPTDTMGMIVTAEGLS
MHQPLTWSDGLRSVAYSYPYILVLGNSTVTVHSMLDQRQKQAMSFNGGIAINNMDDHVLV
AMQKSVMAFVPIPLDKQIQMLLIDKRLDEAFDLLLVANRSNPIKYDTKFVKQVQAQAGFI
HFADGNFSKASELFIESSVDPREIIVLYPLMMPANKNFLPSRPLLHNIKDLTVVVKGSKT
VFAEAKKFLLKYLEKCRNQFPDAKIEIDTALMKLYAECNHTKLCELLSTQNEIFVEEALS
WLTQFKRFHCLALYYCYLNQPIKSLELWHKLVDNEIMDATFPGINFVVNYLCKISNVDLI
WTSISWLLKTDEEVAIKVFTERDDNLLKIDQVCDYLQKFPIALQIYLEYLVYDKKFAQEK
FHTHLAVIYVNHVLKLMKAKIQVSEEVEAARSKLQTLLETSSLYRVSTILQKIGSLPLYK
EIAILYGKMDQHDKALKILVYKLNDFEAAERYCDVISCDKDHKFKQKVFHTLLLVYLQPS
SEEEDVRAEHFVIPVVKLLNTRQKEFDFIRVLDVLPIDWSVELIHSFLSGSVRTNLSSLR
TLKIQSSLSRQDYVDNKKYLVKFQHGRILMTDSSICDFCKKPFNEPISACYPNGTLVHAH
CSKNKHKCPVTGKEFT
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaaaagcatttgatttggtgccagtggttgacaaggtcaatttaagtggtgat
agaaccaaaagtagcattgaatgcttagaactggttcaagaaaatttatacatcggaaca
actgattgctttctcattcattatgctattgagcaaggcatctctcctacaggtaaaaca
acttttatgaacaaacttcagcggcacaaacatttaggacttcgcaaacctataaagcag
ctactagcctgtgctgcagtaggacagttacttgttttatgcgatggaaatgtctattca
gtatctatgtacggtttggaaatacgaattggagctaataaagaaatgtttaagggagtg
actgtgatggctcgaaataataagccacctgtgtttaatcctgatgaggtacagatatgc
atcggaacaaaacgtaaaacagttcaaatttatacactaactacgaacggttgtatgatg
ttaaaggaaattaacttaacagatcctccaaatgtattagcaatagattcacagacaata
tgcacaacacttggtcaccaatattttctcattgattatgttacatcagttgtccaagaa
ttatttatgtatgaagctcataatgtcttacccatggttaagagaattggacatgaagag
tttctgctaaatggaccaactgataccatggggatgatagttactgcagaaggtctgtca
atgcaccaaccgttgacatggtcagatggactgcgctctgttgcctactcatatccatac
attctggttttaggaaatagcactgtaactgttcatagtatgttagaccaaagacagaag
caagcaatgtcctttaatggtggtattgctataaataatatggatgaccatgttttagtt
gcaatgcaaaagtcagttatggcttttgtacccatacctttagataaacaaattcaaatg
ctacttatcgataaaaggctagatgaggcgtttgatttgctacttgttgcaaatcgctct
aacccaattaagtacgatactaagtttgttaagcaagtccaagctcaagctggctttatc
cattttgctgatgggaatttcagtaaagcatcggaattattcattgaaagtagtgttgac
cctagagagattattgtgttatatccgttaatgatgccagctaacaagaatttcttacca
tctcggccattacttcacaacattaaagatttgaccgttgttgttaaaggtagtaaaacc
gtgtttgcagaagccaaaaaatttctcctgaaatatcttgagaaatgcaggaaccaattt
ccagatgcaaaaatagaaattgatacagcattgatgaaactgtatgcagaatgtaaccat
acgaagttgtgtgaattactatcaacacaaaatgaaatttttgttgaagaagcattgtca
tggcttacacagtttaaacgattccattgtttagctttatattattgttatttaaaccaa
ccaattaaatcgcttgaactatggcataagttagtagataacgaaattatggatgccacg
tttcctggtattaactttgtggtgaattacttatgcaaaatttcaaatgttgatctaatt
tggacttccatcagctggctattaaaaacagacgaagaagttgccattaaagttttcact
gaaagagatgacaatcttttgaaaattgatcaagtgtgtgactaccttcaaaaatttcca
atagctttacaaatttatttggaatacctagtttacgataaaaaatttgctcaggaaaaa
tttcatacgcatttagctgttatttacgttaaccatgttctgaagctaatgaaagccaaa
atacaggtttcagaagaggtggaagccgctagaagcaaacttcaaaccctgctagagact
tcatccctctaccgtgtatctacgattctgcaaaaaatcggtagtcttccattgtacaaa
gaaattgcaatattatatggaaaaatggaccagcatgataaagctttgaaaatattggtc
tataaactaaatgattttgaggcagctgaacggtactgcgatgtaatatcatgtgataag
gatcataagtttaagcagaaagttttccatacgcttttgttggtttatttacaaccatca
agtgaagaagaagatgtacgagctgagcattttgttattccagttgtaaagttgcttaac
acgagacaaaaagaatttgatttcatccgagtgctagatgtacttccaattgattggtcg
gttgaattaatacattcttttctgtctggttctgtccgaacgaacctttcgtcacttcgt
accttgaagattcaatctagcttatccagacaggattacgttgacaataagaagtattta
gtgaaatttcaacatggcagaattcttatgacggacagtagtatttgcgatttctgcaag
aaaccttttaatgaaccaattagcgcttgttatcctaatggaactttggtccacgcacat
tgtagcaaaaataaacataaatgcccagttactgggaaagaattcacatga
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