Hydractinia symbiolongicarpus: 130657466
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Entry
130657466 CDS
T09218
Name
(RefSeq) CDK-activating kinase assembly factor MAT1-like
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03022
Basal transcription factors
hsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130657466
09124 Replication and repair
03420 Nucleotide excision repair
130657466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsy03021
]
130657466
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130657466
Transcription machinery [BR:
hsy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130657466
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130657466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-UDP
TRAF3_RING
RING_XB3-XBAT31
zf-C3HC4
zf-RING_2
zf-P11
DUF728
Motif
Other DBs
NCBI-GeneID:
130657466
NCBI-ProteinID:
XP_057316435
LinkDB
All DBs
Position
9:25124185..25129250
Genome browser
AA seq
303 aa
AA seq
DB search
MDEQSCPRCKTTTYRNKNLKLLVNVCGHKLCQTCVDVLFSRPSAACLQCNTPLRRSDFRV
QQFEDASVEREVDIRKKIVKIYNKRCEDFDSLRSYNDYLEEVETIIFNLANKTSVEETKK
KVELYKRENEKIIRKNNSKLNQEEALLKATLETEKLNAEEKRKQLLLEEKDLLTQKRKDK
ESLINDLIYANAPAEEVIARHLHVKRQQEQEELEKKSFFFSEKNKLKNMTQLSNKPIIEA
PLFEYKPPKMEWYGPSPPESEAVEINGYLNHIRAASESEKAGGYSESIACRRAIQEAFDC
LFL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacagagttgcccaagatgtaaaaccacaacatatagaaacaaaaatctgaaa
ctactggtaaatgtttgtggacataagttatgccagacatgtgtcgatgtattgttttcg
agaccttctgctgcctgtctacagtgcaatactcctttgagaaggagtgattttagagtg
cagcaatttgaagatgccagtgttgaacgagaagtggatatacgaaaaaaaattgttaaa
atatataataaaagatgtgaagattttgactcactacgatcatacaatgactatcttgaa
gaagtcgaaacaataattttcaatttggccaacaaaacgagtgtagaggagaccaagaag
aaggtggaattgtataaaagagagaacgaaaagattattcggaaaaacaactcaaaatta
aatcaagaagaagctcttttgaaggcaacccttgaaacagagaaattaaacgcggaggaa
aaacgaaaacaacttttgttggaagaaaaggatttgctaacgcagaaacgaaaagacaag
gaaagcctgatcaacgatctgatctatgcaaatgccccagctgaggaagtgatagctcgc
cacctgcatgtcaaacggcaacaggaacaagaggagctcgaaaagaaatcattcttcttt
tcagaaaagaacaaattgaagaatatgactcaattgtcgaataagccaatcatcgaagcg
cctctatttgagtataaaccacctaaaatggaatggtatggaccaagtccgcctgagagt
gaggccgtcgagataaatggctacttaaatcacatacgagctgcatcggaatccgaaaaa
gctggtggatattcggaatcgattgcttgccgtagagctatacaagaagcctttgattgt
ttgtttttgtga
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