Hydractinia symbiolongicarpus: 130657526
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Entry
130657526 CDS
T09218
Name
(RefSeq) DNA repair protein XRCC3-like isoform X1
KO
K10880
DNA-repair protein XRCC3
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130657526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130657526
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
130657526
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
ATPase
RNA_pol_A_CTD
RecA
DnaB_C
AAA_25
AAA_22
WipA_Phos
DO-GTPase1
RNA_helicase
NPHP3_N
nSTAND3
NACHT
AF1548-like_C
ABC_tran
SRP54
SAM_EPH
AAA_33
Motif
Other DBs
NCBI-GeneID:
130657526
NCBI-ProteinID:
XP_057316497
LinkDB
All DBs
Position
9:25249954..25255678
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AA seq
350 aa
AA seq
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MSVSVQNLDIRPRVCTALKKANIHTVKKLFSFSKLELSKKTGLGSADINEVILTAAKATF
DPTPKRLLDVLKKTGTTNSLQHFKLSTGCPSIDKFLNGGLLYPGVTEICGESGSGKTQFC
MQLCLNVERKSKHCSLYICTEDVFPHKRLQQMASCFYQKNKDEMNLTNLSEITDNIFIEH
AADLDALRGILDVQLPVILSSKSIKLIVIDSIAALFRVEFNVSQMAERAKVLAKIGSVLH
KYTHQFQICIVCVNQVMDVFNQSNVNSHSLQKVMPALGLTWSYHVNTRILLSRTHFTLSM
FHPDQKLKLDPIVRCLSILFSSHLPCSKCYYIVDEVGVKAVEIPSLQTNA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtatctgttcaaaacctagacataagaccaagagtgtgcactgcattgaaaaaa
gctaacatccatactgtgaaaaagttgttttcattttcaaaattagagctgagcaaaaag
actggtttgggaagcgctgacataaatgaggtaatattaacagctgcaaaagctacgttt
gatccaaccccgaaacgtttattagacgtgttaaaaaagactggaacaacaaacagtttg
cagcactttaaattatcaactggttgcccaagcattgataaatttttaaatggaggtttg
ctctacccaggggtgactgaaatatgtggtgaaagtggaagtggaaagacacagttttgt
atgcaattatgcttaaatgttgaacggaaaagtaagcattgctctctatacatatgcaca
gaagatgtttttcctcacaaacgtctgcaacaaatggcttcttgtttttaccaaaagaat
aaagatgagatgaaccttacaaacctatctgaaattactgataacattttcattgagcat
gcagctgatttggatgctcttaggggtatattggatgttcaactcccagtcatattatct
tcaaagagtataaagctaatcgtgattgattccattgcagctctttttcgtgttgaattt
aatgtctctcagatggctgaacgtgcaaaggttcttgccaagattggatcagttttgcac
aaatatacgcatcagtttcaaatctgtattgtttgtgtgaaccaggtcatggatgttttt
aaccaaagcaacgtcaacagccatagtttacagaaagtaatgcctgctcttggccttacc
tggtcatatcatgtgaacacaaggattttactgtctcgaacacactttacactatcaatg
ttccatcctgatcaaaagttgaaacttgatccaattgttagatgtttatccatattattc
tcatctcatcttccttgttcgaaatgttactacattgttgatgaagttggtgtaaaagca
gtagaaattcccagcttgcaaacaaacgcttaa
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