Hydractinia symbiolongicarpus: 130657706
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Entry
130657706 CDS
T09218
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsy03041
]
130657706
Spliceosome [BR:
hsy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130657706
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
DUF1633
T7SS_EccA1_N
Motif
Other DBs
NCBI-GeneID:
130657706
NCBI-ProteinID:
XP_057316699
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All DBs
Position
9:3026576..3035659
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AA seq
684 aa
AA seq
DB search
MVRKRAPAQKALSPEKAFKKKKKDNEENGQSSMDNNNLEVITSGNEDSSHGDLMIYGTEE
DCEVPVEDACYDELPDFNSFSKELTDKKKTYWEAVKVDYTDFTNWTCLLQTFTDTEDNLE
AARSAYNCFLRYYPYCYGYWKKFSDLEKKQGNLDKAREVFSRGVKAIHVSIDLWVHYLNF
TIQQNQGKENSQDIIRKLFNEAINAAGMEFKSNKLWNAYIEWEKSLGNLKRVTEIYDKLI
STPTQQYLKNWERFKQHLESHSLSDVLPTEEYVQLMQRIDAIPPGLTTNEEPSIITNEDQ
GKTDDSETKQLKNDNEKETDKIKERVIAERESIFVETAGEIKKRWKYEEAIKRPYFHVKP
LEKSQISNWKDYLDYEIRQGGHKRICFLFERCVVACALYEELWEKYIDYIEPRDQNAARK
VFSRACNIHQIKKYKINLAWATFEEHNKNYTQAADILSSIDKNFPGMIMITMRRVGLARR
MNRPNDIVRIYENAIEKSERIEDKIFYSIKYSHVLAKTVDNKTKARDVLWKALTLGKKHK
RLYLQLLELEIHYGEVDNDHSFKLFNAVENDMSLSEDFRDSFAQRKVEFYEEYGDDIEKI
LQVKESYEHDHKRHRATKRTLSNSSTDSAIKLPKTEAEVNQTAPNVNTVESGSWYNSTAQ
TENSYVDWRNYAAQYANFNQQQRN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggttagaaagcgagcccctgcccaaaaagctttatctccagaaaaagcctttaaaaag
aaaaagaaagacaatgaggagaacggacaaagcagtatggataacaataatttagaagta
attacaagtggaaatgaagattcgtctcatggagatttgatgatctatggcacggaagaa
gattgtgaggtaccagttgaagatgcctgttatgatgagttgccagattttaattcattt
agcaaagaactcaccgacaaaaaaaaaacatattgggaggctgtgaaagtggactacaca
gactttaccaattggacatgtctgttgcaaacattcacggacacagaggacaatcttgag
gcagctcgaagtgcctacaactgcttcttacgatactatccatactgttatggatactgg
aagaaattttctgatttagaaaaaaaacaaggaaatttggacaaggctagggaggtattc
agcaggggtgtgaaagctattcatgttagcattgacttgtgggtgcattatctgaacttt
actattcaacagaatcaaggaaaagaaaacagccaagatattataagaaaattgtttaat
gaagctattaatgcagcaggcatggaatttaaatccaacaaattgtggaacgcatacatt
gaatgggaaaagtcgttaggaaatctcaaacgagtcactgaaatttatgacaaactgata
tcgacacccacacaacagtatttaaaaaattgggaaaggtttaagcagcatttagaaagc
cactcactatcggatgttttaccaacagaggagtatgtccaacttatgcaacgaatagac
gcaattccccctggattgacaaccaatgaggagccatccattataaccaatgaagaccaa
ggtaaaacagatgattcagaaacaaaacaattgaagaatgataacgaaaaggaaactgac
aaaatcaaggaaagagttattgcagaacgtgaatccatttttgttgaaacagcaggtgaa
attaagaagcgttggaaatacgaagaagcaatcaaacgcccttattttcatgtgaaacct
ttagaaaaatcccaaataagtaactggaaagattatttagattatgaaatcagacaaggt
ggccataaaagaatatgttttttgtttgaacggtgtgtggtggcatgtgcattatatgag
gaactgtgggaaaagtatattgactacattgaaccacgagaccagaatgctgcaaggaaa
gtgttctcaagagcatgtaatattcaccaaataaagaaatacaaaataaacctagcttgg
gctacttttgaagaacacaacaaaaactatacacaagctgctgacattttaagcagcatt
gataaaaactttcctggcatgattatgataacaatgcgtagagtaggacttgctagaagg
atgaatagacctaatgacattgttagaatatatgaaaatgcaattgagaaatccgaaagg
attgaagacaagatattttatagtattaaatactcccatgtgttagcaaagacagtagat
aataaaactaaagctcgagatgtactttggaaagccttgacgctgggaaagaagcataaa
cgactttatctccaactattggaactggaaatacactatggtgaagtggataatgaccat
tcatttaagctttttaatgctgttgaaaatgatatgagtctgagtgaagattttcgagat
tcatttgcacaacgaaaagttgagttttacgaggaatacggagatgatattgaaaagatt
ttacaagtcaaagagagctatgaacatgatcataaaagacatcgagcaacaaaaagaaca
ttatctaacagttcaacagattcagcgataaaattgccaaagactgaagcagaagtaaat
cagactgctccaaatgtaaatactgtagaatctggctcatggtataattctactgcacag
actgaaaattcttacgttgattggcgtaattatgctgcgcaatatgcaaactttaatcaa
caacaaagaaattga
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