Hydractinia symbiolongicarpus: 130662353
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Entry
130662353 CDS
T09218
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03420
Nucleotide excision repair
hsy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130662353
09124 Replication and repair
03420 Nucleotide excision repair
130662353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsy04121
]
130662353
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130662353
Ubiquitin system [BR:
hsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
130662353
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
130662353
TCR (transcription coupled repair) factors
Cul4-CSA complex
130662353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Lgl_C
Motif
Other DBs
NCBI-GeneID:
130662353
NCBI-ProteinID:
XP_057317183
LinkDB
All DBs
Position
10:complement(9591637..9608774)
Genome browser
AA seq
1145 aa
AA seq
DB search
MSYNYIVTAQEATAINAAVTGHFTGPDDLNLITAKNSRLEVYLVTPEGLQPKMEMNINGR
IATMQLFRPPNEPQDLLFLLTERYRIAILGFKPETGDIVTKAYGDVQDKIGRLCDTGMIG
IIDPQCRVIALHIYDGLLKVIPLELGTNIELKAFNIRLEELKIVDIQFLHGFDVPTIIFV
YQDTHGRHVKTYGISLRDKEFVRGPWKQDNVELEACMVVTVPSPIEGALIVGEESITYHK
GETYLAVAPPAIKQSTLTCYGRVDKDGLRYLLGDMSGRLFMLFLEKQTLPDGSVEVKDLK
VELLGETSIPHCLTYLDNGVVFIGSTLGDSQIVQLTTEANENGSFVSVMKSFPNLGPILD
MCVVDLERQGQGQLVTCSGGLKEGSLRIIRNGIGIHEHASIDLDGIMGLWALKVGSVNTE
FDDTLVLSFVGQSRVLSLSSDEVEEIDIDGFDGDKQTTFCGNVCCQQIVQVTEHSARLIN
CLTKSLVYEWKHAGGRNISVVACYGQQLLLAVGKEVFYLEVQDGNLHQVSSTVLEYEVAC
LDVTPEVKKEKSDVVAAGLWTDISIRILKLPTMEEISKVKLGGEIIPRSIQMSNFEGINY
LLCSLGDGSLFYYIHDRTTGALTEQKKVTLGTKPTVIQPFKSGTATNVFACSDRPTVIYS
SNHKLVFSNVNLKEVCYMSQLHSQTYPNSLAIADKNCLTFGSIDEIQQKLHIRKVPLYES
PRRIAYQEATQTFGVISARTEIRDPYSGKSVVQRPSASCTASSITYSSGDANKGVLTGTS
KDIEGGAIGEEIEVSSFLVIDQHTFEVTHSHQLLDKEYATSLTTCQLANDSNIYYCVGTA
MVHQEEPEPKEGRLILFQLVEGKLIQISSKDVKGAVYSLLEFNGKILAGINSAVSIYEWT
ADKELRQECCYHNTILALFLKAKGDFILVGDLMRSITLLSYKPLEGRLEEIAHDFSPNWM
TAVEIIDDDTFLGAENSYNLFTCQKDSAATSDEDRHHLQQTGKYHLGDFVNVFRHGSLVM
HHTIEQSTPISNSILYGTVRGSIGLVAGLPKDMFDFLSQVQKKLSSYIKSVGKIEHLFWR
SFHNDRKTEPAVGCIDGDLIESFLDLPRAQMKDIVNGLQINEDGMKRDCTEDDLIKIVEE
LNRIH
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacaattacatcgtgactgcacaagaagcaacagccatcaatgcagcagtgaca
ggacatttcactggccctgatgacttaaacttgataactgcaaagaattctcgattagaa
gtgtacctagtaacaccagagggacttcagccaaaaatggagatgaatataaatggtcgt
attgcaaccatgcagttatttcgaccgcctaatgaaccacaagatttgttgtttttgtta
actgaaagataccgtattgcaattttgggatttaaaccagaaacaggagatattgttaca
aaagcatatggagatgtacaagataagattggtagattatgtgatactggaatgattggt
ataatagacccacaatgccgtgtaattgcgttacatatatatgatggattgttaaaagtg
ataccattagaacttggaacaaatattgagctgaaggcttttaatataagactggaagaa
ttaaaaattgttgatattcagtttctgcatggttttgatgtcccaacaattatttttgtc
taccaagacactcatggaagacatgtaaaaacttatggtatatctttacgtgataaagag
tttgttcgaggaccttggaaacaagacaatgttgaacttgaagcctgcatggttgtaaca
gtacccagtcccattgaaggtgcattaatcgttggagaagaatccattacatatcataaa
ggtgaaacatacttggctgttgcacctccagctataaaacaaagcactcttacttgttac
ggtcgtgttgacaaagatggattacgctaccttcttggagatatgtcaggtcgtctgttt
atgttatttctggagaaacaaactctgccagatggtagtgtggaagtaaaagatttaaaa
gttgaacttttgggcgagacttcaattcctcactgtctaacatacttagacaatggtgtt
gtttttattggttccactcttggagattctcagattgtacagcttacaacagaagccaat
gaaaatggctcttttgtgtctgtgatgaagtcatttccaaatttgggacctattttagac
atgtgtgttgttgacctagaaagacaaggtcaaggtcagctcgtcacatgttctggtgga
cttaaagaaggctccctgcgaattattcgaaacggaattggaatccacgaacacgcttct
attgatttagatggaattatgggactttgggcattaaaagttggctcagtaaacacagaa
tttgatgacacattggttttatcttttgttggtcaatcaagagtgttatcattaagtagt
gatgaagtagaagagattgatattgatgggtttgatggcgataaacaaacaacattttgt
ggtaatgtgtgttgtcaacaaattgtgcaggtgacagaacactcagctcgactcatcaac
tgtctcacaaaatcacttgtctacgaatggaaacatgctggtggtcgaaacattagcgtg
gtggcttgttatggtcagcaactgttacttgcagttggaaaagaagtattttatttggaa
gtacaagatgggaacttgcaccaagtcagttcaactgttttggaatacgaagttgcttgt
cttgacgtcacaccagaagtcaaaaaagagaaatcagacgttgttgctgcgggtttgtgg
acagacatctccattcgcatattaaagctacctaccatggaagaaatatcaaaagttaag
ctcggtggagaaatcatacctcgatcaatccaaatgtcaaattttgaaggaattaattac
ttgttgtgttcactcggtgatggttccttgttctattatattcacgacagaactacaggt
gctttaactgaacagaagaaagtcacacttggtactaaaccaactgtgattcagcctttc
aaatctggcaccgcaacaaacgtgtttgcatgttcagaccgtcctaccgtgatatactcg
agcaatcacaaactagtcttttcaaatgtcaatttaaaagaggtgtgctacatgagtcaa
cttcattctcaaacttatccaaacagtcttgctatcgccgacaaaaactgtttaaccttt
ggttcgattgatgaaatccaacaaaaacttcatatcagaaaagtacctttatatgaaagt
ccaaggaggatagcttaccaagaagcaactcagacatttggtgtgatatctgctagaaca
gaaatacgcgacccttacagcggtaaaagtgtggtgcaaagaccctcggccagttgtacg
gcttcttccatcacatacagttctggcgatgctaataagggagttctaactggaacgagt
aaagatatcgagggaggagcaataggcgaagagatcgaggtatcatccttcctcgtaatc
gatcagcacacgtttgaagtaacccattcacaccaacttcttgacaaagaatatgcaact
tcactgacgacttgtcagctagcgaacgattccaacatttattactgtgtcggaacagcc
atggtacatcaagaagaacccgaacccaaagagggccgacttattctatttcagttagtt
gaaggtaagttaatacaaatttcaagtaaagatgtgaaaggagctgtgtactcgttattg
gagtttaatggtaaaatcttggctggcattaacagtgctgtttccatctacgagtggacg
gctgacaaagaacttcgtcaagagtgttgttatcataacacgatacttgcattattttta
aaagcaaaaggagatttcatattggttggcgatctgatgcggtctataactcttctttca
tacaaacctttggaaggtcgccttgaagagattgcgcatgatttttcaccaaattggatg
acagctgttgaaataatcgacgatgacacatttctcggtgctgagaattcttataacttg
tttacttgtcagaaagacagcgctgctaccagtgacgaagatcgtcatcatctgcagcaa
acgggaaaatatcatcttggtgactttgtgaatgttttcagacatggatcactggtaatg
catcacaccatagaacaatcaacacccatctcaaactcgattttatatggaacagttcgc
ggctcaatcggtcttgttgctggtttgccgaaagacatgttcgactttttgtcccaagta
cagaagaagttgagttcttatatcaaaagcgtgggtaaaatagagcacttattttggcga
tccttccacaacgatcgcaaaacagaacctgccgtcggttgtattgatggcgatctgata
gaaagttttctcgatttgccgagagcacaaatgaaagatattgtcaatggcttacaaatt
aacgaagatggaatgaaaagagattgtactgaagatgacctaataaagattgtagaagaa
cttaacaggatccattaa
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integrated database retrieval system
