Hydractinia symbiolongicarpus: 130662410
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Entry
130662410 CDS
T09218
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
130662410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsy03036
]
130662410
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130662410
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
130662410
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
130662410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
TFIIF_beta
PKMT_2nd
Motif
Other DBs
NCBI-GeneID:
130662410
NCBI-ProteinID:
XP_057317260
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All DBs
Position
10:9695177..9708167
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AA seq
1208 aa
AA seq
DB search
MEEEDEENRKSLKQNHIVSVGVANENRNICSYGISINTSDIQSVNLEQQDEELQLLDVDV
YEQEKFEKGVFHQVNSVLSNAEKRFKQNILQKEIIQIKNEIKIVTGEKDDINKVFLSAKD
GGSTNTVSFSLLQQIQSKEALIKRLETKLLDTQQRLSKLDKNEDNKAKQDYAHDESVRLG
EITPFEALGMKKNARSEKPENETNKVESNDDESSEIIQKKESLKENITKLSDEDDEYIPD
YHDVSSDDELVDMPEKAVKKEKLNQKKLKDYMQKTIDDGDFKSFRERMRKLHVKNTLRNA
CKAGEVMEEYDPGDFSDNEESDDEVAVEDDFVLPKKTWNKLYRYQRVGVRWLWQLHNQQA
GGIVGDEMGLGKTIQIISFLAGLDYSKKKATTVNRNLGLGPVLIVCPATVMKQWVAEFHK
WWPKFRVGILHDSGSFSGRKATLIKAINNHPGVLITTYAGVRINKKELYRYHWQYVILDE
GHKIRNPDSDVTLACKQFDTPHRIILTGTPMQNSLKELWSLFDFAYPGRLGTLPVFMTEF
SVPITMGGYANASSVQVQTAYKCSCVLRDTVSPYMLRRLKKDVKKSLELPTKNEQVLFCK
LTDEQKELYKEYINSKDVVAMLAGNMKVFPGLIKLRKICNHPDLVYLHEQNASNALRVFD
GGYGNWKRSGKMVVVESLLRIWNEKGHHVLLFSQSKQMLNILEEFLKTFGYTYLRMDGTT
NVGSRQTLVKKFNEDKSIFVFLLTTRVGGLGLNLIGADRVIIYDPDWNPSTDTQARERSW
RIGQERHVTIYRLMTTGTIEEKIYHRQIFKQFLTNRVLTNPLQRRFFKSNDLYELFALGD
IGPMQSTETGAIFAGTGSEIRMRRKGKHSKNSDKQETLAKKMKTSKEYNVEVNVSKSAEK
MFDQGVSCPSLNTQQRSSETKREVSFETPLQPGRSMEKSFPAKSNKKGKEKKKKKKKKKV
AVDGVQIDDVEKSEAYRCSDDEEQESKEKIQNEKDVLMSLFRSSGLHSALKHDRIEQAGN
PDYVLVEKEAEKVAKQAVNALRQSRAECRNNGLSVPTWTGHAKTVANSSITKKLRFGKKS
NKNVETAAVKRSVSTNEDLDLESETIDVSSSALLARMRTRNMFGTSSSSSQVTSEGSSSK
EVTLLKDIQEFILQQTDGTATTNEMTSFFATRIEKTQNALFKQLLKQICDFHRRNDGVGN
WKLKEEFK
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaagatgaagaaaaccgaaaatctttaaaacaaaatcatattgtttcagtt
ggtgttgccaatgaaaatagaaacatttgcagctatgggatttcaatcaatacatcagac
attcaatcagttaatctagaacaacaagatgaagaactccagttacttgatgttgatgtt
tatgaacaggaaaagtttgaaaagggagtgtttcatcaagtcaactcagtcttatcaaat
gcagaaaaacgtttcaaacagaatattctacaaaaagaaattattcaaatcaaaaatgaa
attaaaattgtaacaggagaaaaagatgatatcaataaagtatttttgtctgcaaaggat
ggtggttcaacaaatacagtttcattttccctattgcaacaaatacaaagcaaggaggcg
ttgataaaacgcttagaaacgaaattattggatacccagcagagattgtcaaagttggac
aaaaatgaagataataaagctaaacaggattatgcgcatgatgaatctgttagacttggt
gaaattactccatttgaagcccttggtatgaaaaaaaatgcaagaagtgaaaaaccagag
aatgaaaccaacaaagtggagagtaatgatgatgaatcaagtgagataatacagaagaaa
gaatcattgaaggaaaatattaccaagctgtctgatgaagatgatgagtatattcctgat
tatcatgatgttagcagtgatgatgaattggttgacatgccagaaaaagctgttaaaaag
gaaaaacttaaccaaaaaaagcttaaagattatatgcaaaaaactattgatgatggtgat
tttaaatccttcagagaaagaatgagaaagcttcatgtgaagaatacattaagaaatgca
tgtaaagcaggggaagtaatggaagagtatgaccctggggatttttctgacaatgaagag
agtgatgatgaagtcgctgtggaagatgattttgttctgccaaaaaagacatggaataag
ttgtaccgatatcaacgtgttggggtacgatggctttggcagttgcacaatcaacaggct
ggaggtattgttggagatgaaatgggtcttggaaaaacgattcaaattatttcttttctt
gctggattagattactcaaagaaaaaagcgaccactgtaaacagaaatcttggactagga
cccgtgctcattgtttgccctgctactgttatgaagcagtgggttgctgaatttcataag
tggtggccaaagtttcgcgttgggattttgcatgattcaggctcattttcaggaagaaag
gctacgttgataaaagctattaataaccatcctggagtactcataacaacttatgctgga
gttcgaatcaacaaaaaagaactgtaccgctatcactggcaatacgtcatattagatgaa
ggtcataaaatccgaaatccagattcagatgtgactcttgcttgcaaacagtttgatact
cctcatcgaataatcctgactggaactccaatgcagaacagtctaaaagaattgtggtca
ttgtttgattttgcgtatcctggacgacttggtacactacctgtctttatgacagaattt
tctgtaccaataacaatgggtgggtatgcaaatgcttcttctgtccaggtacaaacagct
tataaatgttcctgtgttttgagagacactgtgagtccatatatgctccgacgactgaaa
aaagatgttaaaaaaagtttggaacttccaacaaagaacgaacaggttttattctgcaaa
ttaacagacgagcagaaggaattgtataaagaatatattaattcaaaagatgttgtagct
atgcttgctggaaatatgaaggtttttcctggtttaatcaagttacggaagatttgcaac
catcctgatttagtttatttacatgaacaaaacgcgagtaacgccctgcgtgtctttgat
ggtggatatggaaattggaaacgttctggtaaaatggtggtagtggaaagtctcttacga
atttggaacgaaaagggccatcatgtgttattgttttcccagtcaaaacagatgctcaat
attttggaagaatttctgaagacatttggttacacttacttaagaatggacggtacaacg
aatgtgggaagtcgacaaactcttgtgaagaaatttaacgaggataaaagtatttttgtt
tttctgttgacaactcgtgttggaggactgggtttaaatttaattggagctgatcgtgtc
atcatttatgatcctgactggaatcccagcacagatactcaggcgcgagaacgatcttgg
aggattgggcaagagcgtcacgtaacgatatatcgattgatgaccacaggcaccatagaa
gaaaaaatttatcacagacaaatctttaaacagtttctcacaaatcgcgtgttaacaaat
ccattacagcgacgcttcttcaaatcgaacgatctttacgaactgttcgcactgggcgac
ataggtcctatgcagagcacagaaacaggtgccatatttgcagggacaggatctgagatt
agaatgcgaagaaaaggaaaacattctaaaaactcagataagcaagaaacattagcaaaa
aaaatgaaaacaagtaaggaatataatgtggaggtgaatgtcagtaaaagtgctgaaaag
atgtttgaccagggtgtgtcatgtccgtctttaaatacgcagcaacgttctagtgaaacc
aaaagagaagtatcattcgagacaccattgcagcctggtagaagtatggaaaagagtttc
cctgcgaaatcaaataagaaaggaaaggagaagaagaagaagaagaagaagaagaaggta
gctgttgacggtgttcaaatagatgatgttgagaagtcggaagcctatcgttgttctgac
gatgaagagcaagaaagcaaggagaagattcaaaacgagaaagacgtgttaatgagtttg
tttcgatcttctggtttacacagtgcgttaaagcacgatcgtatcgaacaagcgggaaac
ccggactatgttcttgttgagaaggaagcagagaaagttgccaagcaagctgtcaatgca
ttgcgtcagtctagagctgaatgtagaaataatgggctttctgtgccaacttggactgga
catgctaaaacagtggctaattctagtattactaaaaaacttcgctttggtaaaaaatcg
aataaaaacgtcgaaactgctgccgtgaaacgcagtgtgtcaacgaatgaagatttagac
ttagagagtgaaaccatagatgtatcttcgagtgcattgttagcacggatgagaactcga
aatatgtttggaacaagttcatcctcgtcacaagtcactagcgaaggctcatcttcaaag
gaagtgactctgttgaaagacattcaagagttcattctacaacagacggacggcactgcc
acgacaaatgagatgacgtcatttttcgcgacccgtatagagaaaacgcagaacgctttg
ttcaagcaattactcaagcaaatatgcgatttccatcgacgcaatgacggggtgggaaat
tggaaattgaaagaagaatttaaataa
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