KEGG   Hydractinia symbiolongicarpus: 130662410
Entry
130662410         CDS       T09218                                 
Name
(RefSeq) DNA excision repair protein ERCC-6-like
  KO
K10841  DNA excision repair protein ERCC-6
Organism
hsy  Hydractinia symbiolongicarpus
Pathway
hsy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    130662410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsy03036]
    130662410
   03400 DNA repair and recombination proteins [BR:hsy03400]
    130662410
Chromosome and associated proteins [BR:hsy03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    130662410
DNA repair and recombination proteins [BR:hsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      130662410
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII TFIIF_beta PKMT_2nd
Other DBs
NCBI-GeneID: 130662410
NCBI-ProteinID: XP_057317260
LinkDB
Position
10:9695177..9708167
AA seq 1208 aa
MEEEDEENRKSLKQNHIVSVGVANENRNICSYGISINTSDIQSVNLEQQDEELQLLDVDV
YEQEKFEKGVFHQVNSVLSNAEKRFKQNILQKEIIQIKNEIKIVTGEKDDINKVFLSAKD
GGSTNTVSFSLLQQIQSKEALIKRLETKLLDTQQRLSKLDKNEDNKAKQDYAHDESVRLG
EITPFEALGMKKNARSEKPENETNKVESNDDESSEIIQKKESLKENITKLSDEDDEYIPD
YHDVSSDDELVDMPEKAVKKEKLNQKKLKDYMQKTIDDGDFKSFRERMRKLHVKNTLRNA
CKAGEVMEEYDPGDFSDNEESDDEVAVEDDFVLPKKTWNKLYRYQRVGVRWLWQLHNQQA
GGIVGDEMGLGKTIQIISFLAGLDYSKKKATTVNRNLGLGPVLIVCPATVMKQWVAEFHK
WWPKFRVGILHDSGSFSGRKATLIKAINNHPGVLITTYAGVRINKKELYRYHWQYVILDE
GHKIRNPDSDVTLACKQFDTPHRIILTGTPMQNSLKELWSLFDFAYPGRLGTLPVFMTEF
SVPITMGGYANASSVQVQTAYKCSCVLRDTVSPYMLRRLKKDVKKSLELPTKNEQVLFCK
LTDEQKELYKEYINSKDVVAMLAGNMKVFPGLIKLRKICNHPDLVYLHEQNASNALRVFD
GGYGNWKRSGKMVVVESLLRIWNEKGHHVLLFSQSKQMLNILEEFLKTFGYTYLRMDGTT
NVGSRQTLVKKFNEDKSIFVFLLTTRVGGLGLNLIGADRVIIYDPDWNPSTDTQARERSW
RIGQERHVTIYRLMTTGTIEEKIYHRQIFKQFLTNRVLTNPLQRRFFKSNDLYELFALGD
IGPMQSTETGAIFAGTGSEIRMRRKGKHSKNSDKQETLAKKMKTSKEYNVEVNVSKSAEK
MFDQGVSCPSLNTQQRSSETKREVSFETPLQPGRSMEKSFPAKSNKKGKEKKKKKKKKKV
AVDGVQIDDVEKSEAYRCSDDEEQESKEKIQNEKDVLMSLFRSSGLHSALKHDRIEQAGN
PDYVLVEKEAEKVAKQAVNALRQSRAECRNNGLSVPTWTGHAKTVANSSITKKLRFGKKS
NKNVETAAVKRSVSTNEDLDLESETIDVSSSALLARMRTRNMFGTSSSSSQVTSEGSSSK
EVTLLKDIQEFILQQTDGTATTNEMTSFFATRIEKTQNALFKQLLKQICDFHRRNDGVGN
WKLKEEFK
NT seq 3627 nt   +upstreamnt  +downstreamnt
atggaagaagaagatgaagaaaaccgaaaatctttaaaacaaaatcatattgtttcagtt
ggtgttgccaatgaaaatagaaacatttgcagctatgggatttcaatcaatacatcagac
attcaatcagttaatctagaacaacaagatgaagaactccagttacttgatgttgatgtt
tatgaacaggaaaagtttgaaaagggagtgtttcatcaagtcaactcagtcttatcaaat
gcagaaaaacgtttcaaacagaatattctacaaaaagaaattattcaaatcaaaaatgaa
attaaaattgtaacaggagaaaaagatgatatcaataaagtatttttgtctgcaaaggat
ggtggttcaacaaatacagtttcattttccctattgcaacaaatacaaagcaaggaggcg
ttgataaaacgcttagaaacgaaattattggatacccagcagagattgtcaaagttggac
aaaaatgaagataataaagctaaacaggattatgcgcatgatgaatctgttagacttggt
gaaattactccatttgaagcccttggtatgaaaaaaaatgcaagaagtgaaaaaccagag
aatgaaaccaacaaagtggagagtaatgatgatgaatcaagtgagataatacagaagaaa
gaatcattgaaggaaaatattaccaagctgtctgatgaagatgatgagtatattcctgat
tatcatgatgttagcagtgatgatgaattggttgacatgccagaaaaagctgttaaaaag
gaaaaacttaaccaaaaaaagcttaaagattatatgcaaaaaactattgatgatggtgat
tttaaatccttcagagaaagaatgagaaagcttcatgtgaagaatacattaagaaatgca
tgtaaagcaggggaagtaatggaagagtatgaccctggggatttttctgacaatgaagag
agtgatgatgaagtcgctgtggaagatgattttgttctgccaaaaaagacatggaataag
ttgtaccgatatcaacgtgttggggtacgatggctttggcagttgcacaatcaacaggct
ggaggtattgttggagatgaaatgggtcttggaaaaacgattcaaattatttcttttctt
gctggattagattactcaaagaaaaaagcgaccactgtaaacagaaatcttggactagga
cccgtgctcattgtttgccctgctactgttatgaagcagtgggttgctgaatttcataag
tggtggccaaagtttcgcgttgggattttgcatgattcaggctcattttcaggaagaaag
gctacgttgataaaagctattaataaccatcctggagtactcataacaacttatgctgga
gttcgaatcaacaaaaaagaactgtaccgctatcactggcaatacgtcatattagatgaa
ggtcataaaatccgaaatccagattcagatgtgactcttgcttgcaaacagtttgatact
cctcatcgaataatcctgactggaactccaatgcagaacagtctaaaagaattgtggtca
ttgtttgattttgcgtatcctggacgacttggtacactacctgtctttatgacagaattt
tctgtaccaataacaatgggtgggtatgcaaatgcttcttctgtccaggtacaaacagct
tataaatgttcctgtgttttgagagacactgtgagtccatatatgctccgacgactgaaa
aaagatgttaaaaaaagtttggaacttccaacaaagaacgaacaggttttattctgcaaa
ttaacagacgagcagaaggaattgtataaagaatatattaattcaaaagatgttgtagct
atgcttgctggaaatatgaaggtttttcctggtttaatcaagttacggaagatttgcaac
catcctgatttagtttatttacatgaacaaaacgcgagtaacgccctgcgtgtctttgat
ggtggatatggaaattggaaacgttctggtaaaatggtggtagtggaaagtctcttacga
atttggaacgaaaagggccatcatgtgttattgttttcccagtcaaaacagatgctcaat
attttggaagaatttctgaagacatttggttacacttacttaagaatggacggtacaacg
aatgtgggaagtcgacaaactcttgtgaagaaatttaacgaggataaaagtatttttgtt
tttctgttgacaactcgtgttggaggactgggtttaaatttaattggagctgatcgtgtc
atcatttatgatcctgactggaatcccagcacagatactcaggcgcgagaacgatcttgg
aggattgggcaagagcgtcacgtaacgatatatcgattgatgaccacaggcaccatagaa
gaaaaaatttatcacagacaaatctttaaacagtttctcacaaatcgcgtgttaacaaat
ccattacagcgacgcttcttcaaatcgaacgatctttacgaactgttcgcactgggcgac
ataggtcctatgcagagcacagaaacaggtgccatatttgcagggacaggatctgagatt
agaatgcgaagaaaaggaaaacattctaaaaactcagataagcaagaaacattagcaaaa
aaaatgaaaacaagtaaggaatataatgtggaggtgaatgtcagtaaaagtgctgaaaag
atgtttgaccagggtgtgtcatgtccgtctttaaatacgcagcaacgttctagtgaaacc
aaaagagaagtatcattcgagacaccattgcagcctggtagaagtatggaaaagagtttc
cctgcgaaatcaaataagaaaggaaaggagaagaagaagaagaagaagaagaagaaggta
gctgttgacggtgttcaaatagatgatgttgagaagtcggaagcctatcgttgttctgac
gatgaagagcaagaaagcaaggagaagattcaaaacgagaaagacgtgttaatgagtttg
tttcgatcttctggtttacacagtgcgttaaagcacgatcgtatcgaacaagcgggaaac
ccggactatgttcttgttgagaaggaagcagagaaagttgccaagcaagctgtcaatgca
ttgcgtcagtctagagctgaatgtagaaataatgggctttctgtgccaacttggactgga
catgctaaaacagtggctaattctagtattactaaaaaacttcgctttggtaaaaaatcg
aataaaaacgtcgaaactgctgccgtgaaacgcagtgtgtcaacgaatgaagatttagac
ttagagagtgaaaccatagatgtatcttcgagtgcattgttagcacggatgagaactcga
aatatgtttggaacaagttcatcctcgtcacaagtcactagcgaaggctcatcttcaaag
gaagtgactctgttgaaagacattcaagagttcattctacaacagacggacggcactgcc
acgacaaatgagatgacgtcatttttcgcgacccgtatagagaaaacgcagaacgctttg
ttcaagcaattactcaagcaaatatgcgatttccatcgacgcaatgacggggtgggaaat
tggaaattgaaagaagaatttaaataa

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