Hydractinia symbiolongicarpus: 130662431
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Entry
130662431 CDS
T09218
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130662431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130662431
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
130662431
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
130662431
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
Motif
Other DBs
NCBI-GeneID:
130662431
NCBI-ProteinID:
XP_057317288
LinkDB
All DBs
Position
10:21842157..21843098
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AA seq
190 aa
AA seq
DB search
MSEKEVTVPGERLGSVSEFSPGVGTYVRNGFIYSKLCGDKIIKTEDDKHTIEVIRNKLQN
VVPDVDSIAMCKVVSNNPRFCKVVILSVNGISLKGTFKGMIRKEDVRATEKDRVKMYESF
RPGDIVLTRVLSLGDSHSYYLSTSENELGVIYAVSESGHPMIPISWHQMQCTKNGMIEHR
KVAKVKVRQV
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaagaggtgacagtccctggagaaaggcttggcagtgtctcggaattttct
ccaggtgttggaacctacgtgagaaatggattcatatattccaaactttgcggcgacaag
attataaaaacggaggacgacaagcacacaattgaagtaatacgtaataaactacagaac
gttgtaccagatgtcgattctatcgcaatgtgtaaagttgtaagcaacaacccgcggttc
tgtaaagtagtcattcttagcgtaaatggaatctctttaaagggtacatttaaaggcatg
attcgtaaagaagacgtacgagctaccgagaaagatcgagtgaaaatgtacgaatcgttt
agacccggcgatatcgttttaactcgtgttctatcgctaggcgactcacattcgtattat
ttatcaacttcggagaacgaactcggtgtaatttatgcagtcagtgaatctggacatcca
atgattccaataagctggcatcagatgcagtgcacaaaaaacgggatgatagaacatcga
aaggtggcgaaagtaaaagtgcgacaagtatag
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