Hydractinia symbiolongicarpus: 130662718
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Entry
130662718 CDS
T09218
Name
(RefSeq) DNA repair protein RAD50-like isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03440
Homologous recombination
hsy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130662718
03450 Non-homologous end-joining
130662718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsy03032
]
130662718
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130662718
DNA replication proteins [BR:
hsy03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
130662718
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
130662718
BRCA1-C complex
130662718
NHEJ (non-homologous end-joining)
MRX complex
130662718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
PCRF
AAA_29
AAA_21
AAA_16
AAA_25
ABC_tran
Motif
Other DBs
NCBI-GeneID:
130662718
NCBI-ProteinID:
XP_057317616
LinkDB
All DBs
Position
10:complement(9409924..9440926)
Genome browser
AA seq
1336 aa
AA seq
DB search
MAMIHKMKIMGIRSYSPEGSVIEFQTPLTIIVGHNGTGKTSVIESLSYVITGGLPPGCKN
QAFVHDPKLAGKKEVKGQVKLVFTDITGNKLTGQRSLISTVKDKKVETKSMDGVIVKRTA
NGERASTNCRATDFSREMISRLGVSKAVLENVIFCHQEEANWPLSVGKVLKQKFDAIFAA
TRYIKALESIRNVRKEQGKEVEKYDAELVYLEQNKEKAKEITQELEKAELQVAASKKKIK
KIKTSSKPYEAKLAELSSISQEIADIGKRIETNQITKDQLLKNVAELKNKIVNKFQGTYK
KLKETALKHESTLEKRQIKLESLESMSNILCKEMDKLAKTRMNLREESVKLQQEAETQQK
YVKSRDRYIKNFSNEYDVQGFESGQYSPEEVDLFLKRLEEIHTVMESEGKKTQELDNSKI
DKVETSIGQLEKSLHRHEGIIEQKQKLIESNTTKLLSINDSLNSLATSENSLQNIEKKLE
KATTNLEDFENKFNSSQVKDEVNDLMTRKKKEDAILNQLREKEDIMIQQSKSQTKVDMLN
NNKADKEDTIQEILRKHKESLESIFVSCPPASELKKKLEEFLQSEHSKLLQASQQYDKII
QSITEKETEKKMLREEIQKKEEKMSESKAKIHQTCAENDYNEFRELVQKRTEKYSSALFE
IDAFERIYEKYIQQLQDDEVKEKGCPLCHRKFVLQNSVKELVEELSNKLIHVPEKRNKNQ
IALDKERKLNEKLMDLAPVKSVVDTLLNELPLFKEKVGDLTKEIEKERQNLTKIELTKNL
AETALKIARSMESDMSVLDNHLSQIQDFDIQLNLENSKLSGVTSGKTMQSLREEVQVKQS
QVDHLSQNIGQKNDQLMEYEKQLSLQNKSINELTSQKLSLQSELQQSLQLQKQKEEISSA
VQAYKKEIKQATGQIRPLNARIKKELKKKKQVILKKEENEKVTRDKLERIRNYKTSISSY
TKDINKFITSGKGTAVDDKNEEIEIIEQQLKQKKNELREKTSEIDSIREELSQKELRKRE
LDDNIQLIETNKEIQKLDDSIKELENQLSEYGVHQNVVDEYSTCQQILNEHHKDCANLEG
QLKGFEDEVSRCKRELNSSLYENAEKKHCDMKIDIRTTELVNKDLDKYYKALDKAIMKYH
SLKLKEINKIIKEYWMKTYKGYDIDTIEVVAEDDDDGSGASKARRSYNYRVCMIKSDKYL
DMKSRCSAGQKVLASIIIRLALAETFCLNCGILALDEPTTNLDEENIASLASSLREYVKF
ILLLISFKDVLKRISFFFSIIEVRRQQRNFQLLIITHNEEFVQALGRSDFVEYYFRVYKD
EEGYSRIHKLRMVDKE
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgatacataagatgaagatcatgggtattagaagttattcaccagaaggaagt
gtaattgaattccagacaccattaaccattatagttggacataacggtactggtaaaacg
agtgttattgaaagtttaagttatgtgataactggaggtctaccacctggatgcaaaaat
caagcctttgttcatgatcctaagcttgctggtaaaaaagaagtaaagggtcaagtaaaa
cttgtattcaccgatattactggaaacaaactcactggtcaaagaagcctgatctcaaca
gtaaaggataaaaaagtcgaaactaaatctatggatggtgttattgtaaaacgtacagct
aatggagagcgtgcaagtaccaactgtcgtgccacagatttttcaagagagatgatatca
agattgggcgtgtctaaagctgttcttgaaaatgtgatattttgtcaccaagaagaggcg
aattggccacttagtgtgggaaaggttttaaaacagaagtttgatgcaatatttgctgca
acacggtacatcaaagctttggaaagtatacgcaatgtaagaaaagaacagggtaaggag
gtagaaaaatatgacgcagaacttgtatatttagaacagaacaaagaaaaagctaaagag
ataacacaggagttagaaaaagcggaattgcaggtagctgcatcaaaaaagaagatcaag
aagattaaaacatcttcaaaaccttatgaagcaaaacttgcagaactttcctctatttcc
caagaaatagctgatattgggaagagaattgaaacaaatcagataactaaagatcagctg
ttaaagaatgttgcagaactaaaaaacaaaattgtcaacaagtttcaaggaacttacaaa
aaattgaaagaaactgcattgaagcatgaaagtactcttgaaaaaagacaaataaaatta
gaaagtctggaaagtatgtcgaacattctttgcaaggaaatggacaagctggctaaaact
agaatgaacttaagagaagaaagtgttaaacttcaacaagaagcagaaactcaacaaaag
tatgtcaaatctagagacagatacattaaaaacttttcaaacgaatatgacgtacaagga
tttgagagtggccagtactcaccagaagaagttgatctctttttaaaaagattggaagaa
attcacactgttatggaaagtgaaggcaaaaagactcaagaactagacaacagcaaaata
gataaagttgaaacatcgattggacagcttgaaaagtcactgcacagacatgaaggaata
attgaacaaaaacaaaaattgattgaatctaacacaacaaaactattaagcatcaatgat
tcactcaactctctggctacttctgaaaatagtttgcaaaatattgaaaagaagttggag
aaggcaacaacaaatttggaggactttgaaaataaatttaactcttcgcaagttaaagac
gaagtaaatgatttgatgaccaggaaaaagaaggaagatgccattttgaatcagttgcgt
gaaaaagaagacataatgatccagcaatctaaatcgcaaaccaaagtagacatgcttaac
aataacaaagctgacaaagaagatacaatacaagaaatattgcgaaaacacaaagaaagt
ttagaaagcatatttgtgtcttgcccacctgcatcagagttgaaaaagaaattagaggag
ttcctgcaatctgaacattccaaacttttgcaagcttcgcagcagtacgacaaaataatt
caatccataactgaaaaggagactgaaaaaaagatgctgcgagaagaaatccaaaaaaag
gaagagaaaatgtcagaatcaaaagcgaagattcatcaaacatgtgctgaaaatgattac
aatgaatttcgagaattggttcagaaaagaacagagaaatacagcagtgcccttttcgaa
attgatgcatttgaaagaatctatgaaaaatacatacagcagcttcaagatgatgaagtc
aaagagaagggatgcccactatgtcataggaagtttgttttacaaaacagtgttaaagaa
ctggtcgaagagttaagcaacaaattaatccatgttcctgagaaaagaaataaaaaccag
attgcattggataaagaaagaaaactgaatgagaaattgatggatttagcacctgtgaaa
tctgttgttgacactcttctgaatgaactacctctttttaaagaaaaagttggtgatcta
acaaaggagatcgagaaagaaagacagaatctgactaagatcgaattaacaaagaactta
gctgagactgcactgaaaattgcacgttcaatggagtctgatatgtctgtattggataat
catctttcgcaaatacaagattttgatatccagctaaatctcgaaaatagtaaattatct
ggtgtcacaagtggtaaaacaatgcaatcattacgtgaagaggttcaagtaaaacaaagt
caagttgatcatttgagtcaaaacattggacaaaaaaatgatcagctgatggaatatgag
aaacaactatctctgcagaataaaagtattaatgaattgacatctcagaaactaagtctg
cagtcagaacttcagcaaagtcttcagctacaaaagcaaaaagaagaaatatcatctgct
gtacaagcatataaaaaagaaattaagcaagcaactggtcaaatacggcctcttaacgct
cgcattaaaaaagaacttaaaaagaaaaaacaagttatcttaaagaaagaagaaaatgag
aaagtaaccagagacaagttggaaagaataagaaattataaaactagcatttctagttac
acaaaagatattaataaattcatcacttcaggaaaaggcacggcagtggatgataagaat
gaggaaattgaaataattgagcaacagctaaaacagaaaaaaaacgaattaagggaaaaa
acgagtgagattgatagtattcgagaagaactttcacaaaaagagttgagaaagagggaa
cttgatgataatatccaattaatagaaacaaataaagaaatacaaaaacttgatgacagc
ataaaggagttggaaaaccagttaagcgagtatggtgttcaccaaaatgtagttgatgag
tattcgacatgtcaacaaattttaaatgagcatcataaagattgtgcaaaccttgaaggt
caattgaaagggtttgaagatgaagtatcacgttgtaagagggaattaaatagcagttta
tatgagaacgctgaaaaaaaacattgtgatatgaagattgacattcgaactacagaactg
gttaataaagacttagataagtattataaagctttggataaagctatcatgaaatatcac
agcttaaaattaaaagaaataaataaaattattaaagagtattggatgaaaacttacaaa
ggatatgatattgacaccatcgaagttgttgctgaagatgatgatgatggaagtggagct
tcaaaagcaagaagatcatacaattatcgcgtttgtatgataaaatcagataaatatctt
gatatgaaaagcaggtgcagtgctggtcaaaaggtactagcatctatcatcattcgtttg
gcacttgctgaaacgttttgtctcaactgtgggatcttagcgctggacgaacctaccaca
aacttagatgaagaaaacattgcaagtttagcaagctcactccgagagtatgttaaattt
attttattgttaatttcattcaaagatgtcttgaaaagaatttcatttttctttagtatt
atagaagttcgtaggcaacaaaggaattttcaattattaatcatcacccataatgaagag
tttgtacaggcccttggtagatcagattttgttgagtattatttccgtgtatacaaagat
gaagaggggtattcaagaatccacaaattgagaatggtagataaagaataa
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