Hydractinia symbiolongicarpus: 130662802
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Entry
130662802 CDS
T09218
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03020
RNA polymerase
hsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130662802
09124 Replication and repair
03420 Nucleotide excision repair
130662802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsy03021
]
130662802
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130662802
Transcription machinery [BR:
hsy03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
130662802
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
130662802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
130662802
NCBI-ProteinID:
XP_057317718
LinkDB
All DBs
Position
10:25478643..25479858
Genome browser
AA seq
273 aa
AA seq
DB search
MPYASQPRVKISELTDENVKFTLDSTDLSMANSLRRIFIAEVPTIAIDWVQIENNTSVLH
DEFIAHRVGLIPLTSDESVERMNYSRNCTCMDFCVECSVEFTLEVKCTDETTRHVTSRDL
ISSDPKVIPVTSRNKEDESEYGDTYDIVIVKLRKGQELKLRAFAKKGFGKEHAKWNPTAG
VAFEYDPDNVLRHTTYPRPEEWPKSEYSQLDEDQYQGEFDPNAKADTFYYNVESCGSLRP
ENIVLTGLSVLKKKLSDLQTQHSHEIAADVLAI
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccttatgcaagtcagccaagagtgaaaatctcagaattaactgatgagaacgtaaag
ttcactttagacagtactgatttatccatggctaacagtcttcgaagaatttttattgca
gaggtgcccacaattgcaattgattgggtccagattgaaaataatacatctgtgttgcac
gatgaatttattgcacacagagttgggttaataccattaacaagtgatgaatctgttgaa
cgtatgaattattcacggaattgcacatgcatggacttttgtgtggaatgttccgtagag
ttcacgttagaagtaaaatgtactgatgagacaacgcggcacgttactagtcgagattta
atctcatctgaccctaaagttatcccagtgacatcacgcaataaagaagatgaatcagaa
tatggagatacttatgatattgttatcgtaaaattgcgtaaaggacaagagttgaaatta
cgagcttttgcaaagaaaggttttggcaaagagcatgcaaagtggaatccaaccgcggga
gtagcgtttgaatatgatcctgataatgttttaagacacacaacctaccctcgccctgaa
gagtggcccaaaagcgagtactcgcagcttgatgaagatcagtaccaaggcgagtttgac
cctaatgcaaaagctgatacattttattataatgtggaaagctgtggatcgcttcgacct
gaaaatattgtgctcactggattgtctgtgttaaagaaaaaactcagtgatttgcaaacg
cagcacagtcatgaaattgctgcagatgtgttggcaatctga
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