Hydractinia symbiolongicarpus: 130662842
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Entry
130662842 CDS
T09218
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like
KO
K08526
retinoid X receptor gamma
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsy03000
]
130662842
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hsy03310
]
130662842
Transcription factors [BR:
hsy03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
130662842
Nuclear receptors [BR:
hsy03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
130662842
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
130662842
NCBI-ProteinID:
XP_057317767
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Position
10:complement(3940154..3944693)
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AA seq
464 aa
AA seq
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MIHSELSPPASNEESVNSPRSDPPSVETTITLMHQHQSSSLSSSNASTDFTSSPKGKDYN
FMTSPYNIQKGLLQNTDSSSPNSSIFPLKSPDSTSISQSSPESSTVQIDVKNTQETRSLT
AKVDIKTIKKSSCAVCGDKAEKEHFHAIVCDSCRGFFKRALKNNRKYTCVSTRDCLLTKK
TRNHCQSCRLTKCYKVGMSKEAVELELARDKKEKLLKKKQLTTAVADSSTEVSSSENQIL
TVDLQCISNAELFVDPKISNFVDVSIDPIRQICLAADKQLASLAEWAKRLPHFTELSVLD
QVKLLQWNWPELLIGGFCYRSSAVSNGILLSTGLHLSRENLQKAGVGTLVNKLFTEVINA
MKKLQIDVSEWGCLRAIMLFAPDTKELVEVDQVETIRERYIATLCQYVKKTYPDDPNRLA
HLLLRLPPLKAIALQVLEHLFFFKLIGDVPIDTFLLEMLDVDNT
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatacattctgaactttctcctccagcatccaatgaagagagtgtcaactctcccaga
tctgatccgcccagtgtagaaactactataacactgatgcatcagcaccagtcatcatca
ctaagctccagtaatgcatcaacagactttacttctagcccgaaaggcaaagactataat
tttatgactagtccatataatatacaaaaggggttattacagaatactgattcttccagt
ccaaatagttccatttttcctttaaaaagccctgatagtaccagcattagccaaagttca
ccagaaagtagtaccgttcaaattgatgtgaaaaatacgcaagaaactagatcgctgaca
gcaaaagttgatataaaaactattaaaaagagttcttgtgctgtttgtggagataaagca
gaaaaagaacactttcatgcaattgtttgtgatagctgccgtggtttttttaaacgagct
ttaaaaaataacagaaaatatacttgtgtgtcaacaagggactgtctattgacgaaaaaa
acaagaaatcattgtcagtcatgtcgtttaacgaaatgttacaaggttggaatgagtaaa
gaagctgtcgaattagaattagctcgagataaaaaagaaaaattgttaaagaaaaaacag
ctgactactgcagtagcagacagctcaacagaagtctcctcgtctgaaaatcaaatttta
actgttgatttacaatgtatatccaatgcggagctttttgttgatcccaaaataagcaat
tttgttgatgtgagcatcgatccaatccgacagatatgtcttgctgcagacaaacagctt
gcatcattagctgagtgggcaaaacgactcccccattttacagaattgagcgttcttgat
caagtcaaattgttacagtggaattggccagagttacttattggtggcttctgctatcga
tcgagtgcagtctcgaatggtattctgttatctacaggtctacacttgtccagggagaat
ttacagaaggctggtgtaggaactcttgtcaataaattatttactgaagtcatcaatgca
atgaaaaagttacaaattgatgtgtccgaatggggttgtctaagggcaatcatgttgttt
gctcccgacacgaaagagcttgtggaagttgatcaagtggaaacaattcgcgaacgatat
atagcaacgctttgccagtatgttaaaaagacttatccagatgatcccaatagacttgcc
cacctcctactcaggctaccgccgttaaaggcgattgctttacaagtgttggaacatttg
tttttctttaaattgatcggtgacgttccgatagatacatttctactagaaatgcttgac
gtagacaacacctag
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