KEGG   Hibiscus syriacus (Rose-of-Sharon): 120113832
Entry
120113832         CDS       T09559                                 
Name
(RefSeq) LOW QUALITY PROTEIN: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsyr04121]
    120113832
   03400 DNA repair and recombination proteins [BR:hsyr03400]
    120113832
Enzymes [BR:hsyr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120113832
Ubiquitin system [BR:hsyr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120113832
DNA repair and recombination proteins [BR:hsyr03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    120113832
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_3 ResIII DEAD zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_2 zf-ANAPC11 zf-rbx1 zf-RING_UBOX AAA_34 Rad50_zn_hook Prok-RING_4
Other DBs
NCBI-GeneID: 120113832
NCBI-ProteinID: XP_038990811
LinkDB
Position
Unknown
AA seq 859 aa
MEESTDPVSASSSLDELWEDQDSSSQPSSDTYLLGFVIANIVGLQYYRGTISGREMVGLV
REPLNPFDANAIKVFNTRTLQVGHIERSVAAVLAPLIDSHLIVVEGIVPNSRSASNRFRI
PCQIHIFARLEAFGSVKSAISGGGLNLIAHSDVSFTLSEAAVVKGNKAGGESRSLDKVFK
LVEKNVSKKAAMVPVEPPNEIIISQLLLHQKEGLGWLLHKENSNELPPFWEEKGGEFVNV
LTNYQTDKRPEPLRGGIFADDMGLGKTLTLLSLIAFDKFGSIVPKSGDVVVEENFEENVK
KGKRGRVSKKGTETRKKQKAKGKSVAVADECLSVSGGRTTLVVCPPSVFSSWITQLEEHT
SPGKLKVYMYYGRERTKEVDELKTYDIVLTTYSTLATEESWLDSPMKKMEWWRVILDEAH
VIKNANAQQSKAVTNLKATCRWVVTGTPIQNGSLDLFSLMAFLRFEPFSIQSYWRSLVQR
PLAQGNKNGLSRIQVLMASISLRRTKGNNLVGLPPKTLQTCYVELSVEERELYDQIEGKA
KSVIEEYISNDSLVRNYSTVLGILLRLRQICTSLALLPPDLRALFPSSNIEDVSNNPELL
QKMVVMLQDGEDFDCPICICPPTDVVITRCAHIFCQSCILKTLQRTKPCCPLCRQPLSQS
DLFSAPPESSDADHTEISSRNTASSKVSALVSLLQESIAQKPTTKSVVFSQFRTLLLLLE
KPLTDAGFKILRLDGSMTAKRRAQVIEEFQFPGPDGPTVLLASLKASGAGINLTAASRVY
LMEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIARNSIEERVLDLQERKKKLATEAFGRK
GPKNRKEVTIDDLRTLMSL
NT seq 2580 nt   +upstreamnt  +downstreamnt
atggaagaatcgacagacccggtttccgcttcgtcatccttagatgaactttgggaggat
caagattcctcttcccagccttcctccgacacttacttgctcggctttgtcatcgccaac
atagtaggccttcagtactacagaggcacaattagtggccgagagatggtgggtctcgtg
cgagagcctctcaaccctttcgacgccaacgccatcaaagttttcaacactagaaccctt
caagtcggtcatatcgagcgttccgtggccgcggtactggcgcctttgattgactctcac
ttgattgtcgtcgaaggtatcgtgcctaattctcgtagtgcttctaataggtttagaatc
ccatgtcaaattcacattttcgcaaggctagaagcattcggttctgtcaagtccgctatt
tcaggaggcgggttgaacttaattgcccactctgatgtgtctttcacgttgtcggaggcg
gctgtggttaagggaaacaaggctggaggagagtcccggagcttggataaggttttcaag
ttggtcgaaaagaatgttagcaagaaggcggcaatggtacctgtggagcctccgaatgag
attattatatctcagcttttgttgcaccagaaggaaggtttaggatggttactccataag
gagaattcaaatgagttgcctcccttctgggaggaaaaaggtggagaatttgtaaatgtg
ctgacaaattatcagactgataaacgtcccgagcctttgcgaggaggtatttttgccgat
gatatgggattaggcaagacactaactttgctttccttgattgcatttgataaatttggt
agcattgttccaaagtccggtgatgttgtcgtagaagagaactttgaggagaatgttaag
aagggaaagaggggtagagttagtaaaaaaggtactgagacacggaaaaagcaaaaagca
aaggggaaatcagtggctgtagctgatgagtgtctcagtgtttcaggaggaagaaccacg
ctagttgtgtgtcccccctctgtgttttcatcatggataacacagctagaagaacacact
agtccgggaaaattgaaagtgtatatgtattacggaagagagagaactaaagaagtcgac
gagcttaagacttatgatattgtgttgacaacttatagtaccctggccactgaagaatct
tggttagactcccctatgaagaagatggagtggtggcgagtcattttagatgaggcacat
gtgattaagaatgcaaatgctcaacagagtaaagctgtcactaatttgaaggccacttgt
agatgggttgttacaggaacacccatccaaaatggctccttagacttgttttctttaatg
gcatttttgaggtttgaaccattttctattcaaagctattggagaagtttggttcaacga
ccccttgctcagggtaataagaatggcctctctcgtatccaggttctgatggccagcatc
tccctgcggagaacaaagggaaataacttggttggattgccacctaaaacattacaaaca
tgttatgttgagctttccgtggaagaacgtgaactttatgaccagattgaaggaaaggcc
aaaagtgtcatcgaggagtacatttccaatgacagtctagtacgcaactattcgactgtg
cttggcatacttttacgattgcgacagatttgtactagtctggctctgttacctccggat
ctcagagccttgttcccatctagcaatattgaagatgtatccaacaacccggagttgcta
caaaagatggttgtgatgctacaagatggtgaggatttcgactgtcctatttgcatctgt
cctccaactgatgtagtaattacacgttgtgcccacatcttttgccaatcctgcatcctt
aaaaccctacagcgtacgaaaccctgctgccctttgtgtcgtcaacccttatctcagtcc
gatctcttttcagcccctcctgaatcttctgatgctgatcacactgagatatcatcaagg
aataccgcatcttctaaagtatctgctctagtaagccttcttcaggagtcaatagctcaa
aagccaactacaaagtcggttgtcttctctcagttccgaactctgttgctactacttgaa
aagccgctgacagatgctggttttaagatattgcggttagatggatcaatgactgcaaaa
aggagagcacaagtgattgaagaatttcaatttccgggaccagacgggccaacagtcttg
cttgcaagtctcaaagcttcaggtgcaggtatcaaccttacagctgcatcaagagtttac
ttgatggaaccatggtggaatccagctgttgaggaacaggctatggatagggttcatcgg
atcgggcagaaggaggatgtaaagattgtgaggctgattgctcgaaacagcatagaagag
agggtattggatttgcaggagaggaagaagaagctagcaacagaagcttttggaaggaag
ggcccaaagaatcggaaagaagtcacaatagatgatctccgcactctcatgtccctgtga

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