Hibiscus syriacus (Rose-of-Sharon): 120114162 Help Entry 120114162         CDS       T09559                                  Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism hsyr  Hibiscus syriacus (Rose-of-Sharon) Pathway hsyr03440   Homologous recombination hsyr03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:hsyr00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     120114162    03450 Non-homologous end-joining     120114162  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:hsyr03032]     120114162    03400 DNA repair and recombination proteins [BR:hsyr03400]     120114162 DNA replication proteins [BR:hsyr03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     120114162 DNA repair and recombination proteins [BR:hsyr03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      120114162     BRCA1-C complex      120114162    NHEJ (non-homologous end-joining)     MRX complex      120114162 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 AAA_15 SbcC_Walker_B Rad50_zn_hook AAA_21 SMC_N FapA AAA_29 ABC_tran AAA_16 Motif Other DBs NCBI-GeneID:  120114162 NCBI-ProteinID:  XP_038991090 LinkDB All DBs Position Unknown AA seq 1317 aa AA seqDB search MSTVDKMLIKGIRSFDPENKNVIAFFKPLTLIVGHNGAGKTTIIECLKLSCTGELPPNAR SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTL NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI FSATRYTKALEVIKKLHKDQAQEIKSYKLKLEHLQTLKDAAYKLRESISQNQEKTESLKS QMQVLEKNIDDLDAKIHNAELTLKDLRKLEDQKSTKTAERSTLFKEQQRQYAALAEENED TDEELMEWKTKFDERIMLLDNKIQKMGRNQQDLDEESSAYRRKLNKCTEEIGKLQRDAET LVMSKKDRDSAIERLFARLNLGSTPNSPFSDEVALNLMSQIEARLMELNKDLDEKKQSND LKLKTAWDCYLGASERCNIAEAQKKAKSEIKCSVLKRLEETKSNRDSLEIQISDVNLSLL DEREKNMQVEMDRKKKQLDERNHDEIIQQKQQEVFAIDQKIKVLGHERNLAANDAKERME LSIKKRELEDKKKQQKKIIEEYKDRIRVVLKGRVPPDKDLKREVTQALRAVQMEYDDLST KSSEAEKEVNMLQMKIDDINNNLSKYKKEMDSRKRFLEARLNSLEKQSFTIDSYLKVLET AQEKKDVHKSKYNIADGMRQMFDPFERVARAHHICPCCERPFSAEEEDEFVKKQRVKAAS SAEHMKVLAVESSNAESYFQQLDKLRMVYEEYNKTVKETIPLAEKTLHELTEELDQKSQA HYDVLSVLAQVKTDKDAIETLMGPVETADRLFQEIRGLIAEVEHLECKFDIGGQGGSRTV EEIQLELNNLQSRRDALYNAVEDLRAEQRYMEKDLQSIQVRWHDAREKKVEVANTLRDFK KAEEEIENMSEERRQLDLEEKHLAQALNSAVKEKESLLNDYDCLKVKLDEEYEQQQELRR SYRHEAEELYEINRKIKAYYDLKKGEKLKELQEQKSLMESQLLSCDAKKQETLAELNKSK DLMRNQDQLRRNIEDNLNYRKIKADVDVLTHEIELLQERIMEIGGISKFEGELRKVSEER ERLLSELNRCRGTISVYQNNISKDKADLKQAQYKDIDKRYFDQLIQLKTTEMANKDLDRY YNALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDYISIHSDSQGAGARSYSYKVLMQ TGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAAL LRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAERYYRVTKDDLQHSIIEAQEIFD NT seq 3954 nt NT seq  +upstreamnt  +downstreamnt atgagcacggtggataaaatgctcataaaaggaatccggagcttcgatccggaaaacaaa aatgtcatcgccttctttaaacccctaaccctaatcgttggacacaatggcgctggcaaa actacgattatagagtgtttgaagctttcttgcaccggggagttgcctccaaatgcaagg tccggccatagtttcattcatgatcctaaggttgcaggggagacggagacaaaaggtcaa attaagctccggtttaagacagcagcgggaaaagatgtggtctgtataaggtcattccaa ttgacacagaaggcttctaagatggagtataaagcaatcgagagtgttcttcagacgcta aatcctcacactggagagaaagtttgcctcagctacagatgtgctgacatggaccgagaa atcccagctttgatgggtgtctcaaaagctatcctagagaatgtgatttttgttcaccaa gatgaggccaattggcctttacaagatccttcgactttgaaaaagaagtttgatgatata ttctcagctactagatatacaaaagctttggaggtcataaaaaaacttcacaaggatcag gctcaagagataaagtcttacaagctaaaactggagcacttacagaccttgaaagatgct gcatataagcttcgagaaagcatttcccagaaccaagaaaaaacagaatcattgaaaagc caaatgcaagtcttggagaaaaacattgatgacctggatgctaagattcataatgccgag ttaaccctgaaggatctgcggaagctagaggaccaaaaatcaacaaagactgccgaaagg agcactttgttcaaggaacagcaaagacaatatgcagctcttgctgaggaaaatgaagat actgatgaagagttgatggaatggaaaaccaagtttgatgagaggattatgttattggat aataaaattcagaaaatggggcgtaaccagcaggatttggatgaagagagctctgcttat cggcgtaaattaaataagtgtactgaggagattggcaagcttcaaagggatgctgagacc cttgtgatgtcaaaaaaagacagagattctgccattgaacgattgtttgcacgactcaat ttaggatctactcctaatagcccctttagtgatgaagttgctttgaacctcatgagccaa atagaagcgaggttaatggagctcaataaagatttggatgagaaaaagcaatcaaatgac ctgaagctaaagactgcatgggattgctacctgggtgccagtgagcgttgcaacattgct gaggctcagaagaaggcaaaatcagaaatcaaatgttctgttttgaaacgtttggaagag acaaaaagtaatcgtgattctcttgaaattcaaatttcggatgtcaatctttctctcctt gatgaaagagaaaagaatatgcaagttgagatggacagaaagaaaaaacaacttgatgaa cgaaaccacgatgaaatcatacaacaaaagcagcaggaggtgtttgccatagatcaaaag attaaggtacttggtcatgagagaaaccttgctgctaatgatgccaaagagagaatggag ctatctataaaaaagagagaattggaggataagaagaaacagcaaaaaaagataattgaa gagtacaaagacaggattagagtagtgctaaaagggagggttcctcctgacaaagatctg aaaagggaagttacccaggctttaagggctgttcaaatggagtatgatgacttgagcaca aaatccagtgaagctgagaaggaagtaaatatgttgcagatgaaaatagatgatattaat aataacctatccaaatataagaaagaaatggactctaggaagagatttcttgaagccaga ctaaattctttggagaaacaatcttttaccattgattcctacctaaaagtcctggagact gcacaggagaaaaaagatgtccataaaagcaaatacaacattgcagatggcatgaggcaa atgtttgatccatttgaaagagttgcccgtgctcatcatatttgcccctgctgtgagcgt cctttttctgctgaagaagaagatgaatttgttaagaagcaaagagtcaaggcagctagt tcagctgaacatatgaaagtgttggctgtggaatcatcaaatgccgagtcttactttcag cagttggacaagcttcgaatggtttatgaggaatataataaaactgtaaaggagacaatt cctcttgctgagaaaactttgcacgaactaactgaagagctggatcaaaagtctcaagct cattatgatgtgttaagtgttttagcccaagtaaagacagacaaagatgctattgagact ttgatgggacctgttgaaactgctgacaggctctttcaagaaattcggggtttgatagca gaagttgaacatttggaatgtaagtttgacattggagggcaaggtggttctagaactgtg gaagagatccaattggagctaaacaatttgcaaagcagaagggatgctttatataatgct gtggaggacttaagagcagaacagaggtacatggagaaggatttgcaaagcattcaggtg cgttggcatgatgcaagggagaaaaaagtggaggtcgctaacacattgcgtgattttaaa aaggcagaagaagagatagagaacatgtctgaggagagacgccaacttgatcttgaggag aagcatttagcacaggctctcaactcggcagttaaggagaaggaatcattattgaatgac tatgattgcttgaaagtaaaactcgacgaggaatatgagcagcagcaggaacttcgacgc tcatatcggcatgaagctgaagaactctatgaaattaacagaaagattaaagcgtattat gatttaaagaagggggagaaactaaaggaactgcaagaacagaagtctttgatggaatct caacttctcagctgtgatgctaagaaacaggaaacattggctgagctaaacaaaagcaaa gacttgatgcgtaatcaagatcaactaagacgtaatattgaggataacttgaattacagg aaaataaaagctgatgtagatgtgcttactcatgaaattgagttactgcaagagagaata atggagattggaggtatttccaaatttgaaggtgaactccgaaaagtctctgaagaaagg gagcgacttctttcagagctcaacagatgccgaggaacaatttccgtttaccagaataat atttcgaaggacaaggctgatcttaaacaagcgcaatacaaggacattgacaagcggtac tttgatcagctaatccagcttaagacaactgagatggcaaacaaggacctggacagatac tacaatgcacttgacaaagcactcatgcgcttccattctatgaaaatggaggaaataaac aaaattataagagaattgtggcagcaaacatacagagggcaagatatagattatattagc attcattcggattctcaaggtgctggagctcgttcttacagctataaggttcttatgcaa actggtgatgcggagcttgaaatgagaggacgatgtagtgcaggtcaaaaggtccttgct tctctaatcatacggttggctttagccgagacgttttgcctcaactgtggaatcttagca ctagacgaaccaaccacaaatttggatggcccgaatgccgagagtctggcagcagctctc cttagaatcatggaggacagaaagggccaggagaattttcagctcatagtaatcactcac gacgaacgttttgctcaactgatcggtcaacggcaacatgcagagagatattatcgggtc accaaagatgatcttcagcatagtataattgaagcccaggaaatctttgattga

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