KEGG   Hibiscus syriacus (Rose-of-Sharon): 120114285
Entry
120114285         CDS       T09559                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120114285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsyr03041]
    120114285
   03036 Chromosome and associated proteins [BR:hsyr03036]
    120114285
Spliceosome [BR:hsyr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120114285
 Complex B
    120114285
 Complex C
   U2 SnRNP specific factors
    120114285
Chromosome and associated proteins [BR:hsyr03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    120114285
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N
Other DBs
NCBI-GeneID: 120114285
NCBI-ProteinID: XP_038991179
LinkDB
Position
Unknown
AA seq 1268 aa
MDVDSEIAKTQEERRQKEEELTSLTSLTFDRDLYGGTDRDAYVTSIPVNDDDDANLDSMD
SEVARKLASYTAPKSLLKEMPRGEEDDNSLGFRKPAKIIDREDDYRRRRLNQVISPDRHD
AFAAGEKTPDPSVRTYADVMREQALKREKEETLRAIAKKKKEEEEAAVVEKESGGTAAAV
PKRRNRWDQSQDDGSSAAKKAKTSDWDLPDATPGIGRWDATPTPGRVSDATPSVGRRNRW
DETPTPGRVADSDATPVGGVTPGATPAGVTWDATPKGLVTPTPKRQRSRWDETPATMGSA
TPMAGATPNVPLTPGVTPFGGTDLQTPTPSNLRGPMTPEQYNLLRWEKDIEERNRPLTDE
ELDAMFPQEGYKILEPPSSYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEPP
GGLPFMKPEDYQYFGSLLNEENEDELSPEELKERKIMKLLLKVKNGTPPQRKTALRQLTD
KAREFGANALFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPL
LIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGI
PALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLKSLVEIIEHGLNDENQKV
RTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDAIY
ASYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVR
RMALDRRNYRQLVETTVEMANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVANLGS
SDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGHRVKPYLPQICGTIKWRL
NNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAI
VNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICF
ELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVA
ETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR
DLVHRQTAASAVKHMALGVAGLGCEDALVHLMNYVWPNIFETSPHVINAVTEAIEGMRVA
LGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPILEDEQSSEQNNIYS
RPELMMFV
NT seq 3807 nt   +upstreamnt  +downstreamnt
atggacgtcgatagcgagatagcgaaaacccaagaagagcgaaggcaaaaagaggaggaa
ctaacctcgcttacctccctaactttcgaccgggatctttacggcgggaccgacagggac
gcttacgttacttcgatccctgtcaacgatgacgatgatgccaatctcgattccatggac
tctgaagttgctcggaaactcgcctcttatacggcccctaaatcactcctcaaggagatg
ccccgtggtgaagaagatgataactcgttagggtttaggaaacccgcgaaaatcattgac
cgtgaagatgattataggaggaggaggttgaaccaagtcatttctccggatagacacgat
gcatttgccgccggggagaagactccggatccctccgtgaggacttatgccgatgtgatg
agagagcaggcactgaagagggagaaggaagagactttaagagctatagcaaagaagaaa
aaggaggaagaggaggcggctgtggtggagaaagagagtggtggcacagctgctgcggtg
cctaagaggaggaatagatgggaccagtctcaagatgacggtagttctgcagcaaagaag
gctaaaacgtctgattgggatttgcctgatgcgactcctggtattgggcgttgggatgct
acccctactcctgggagagtttctgatgcaaccccatcagttgggaggaggaataggtgg
gatgagacaccaacacctgggcgggtagctgattcagatgcaaccccagtaggtggagtt
acccctggtgcaaccccagctggggttacatgggatgctactccgaaagggttggttact
cctacgccaaaacgacagagatctaggtgggacgagactcctgcaaccatggggagtgcg
actccaatggcaggggctacaccaaatgttcctcttacacctggggttactccttttggt
ggtactgatttgcaaacaccaacaccaagtaatcttcgtgggcctatgactccggagcag
tataatttgttgaggtgggagaaagatattgaggagagaaatcgacccttgactgatgag
gagcttgatgctatgttcccacaagaagggtataagattttggaaccgccttcatcttat
gtgcctattaggacacctgctcgaaagcttcttgctactccaactcctatgggaacccca
ctatatgctattcctgaggagaatcgtgggcagcagtttgatgtgcctaaggaaccacct
ggtgggttgccatttatgaagcccgaggattatcagtattttggttcattgttgaatgag
gagaatgaggatgagctgtctccagaagagctgaaggaacggaaaatcatgaaacttttg
ttgaaggtaaagaatggaacaccaccacagaggaaaactgctctgaggcagctcactgat
aaggcaagggaatttggtgctaatgcattatttaataggattctgccgttgcttatgcaa
cctacattggaagatcaagagaggcatctcttggttaaggttattgacagggtgctgtat
aaattggatgagttggttaggccttatgtgcacaagattcttgttgtgatcgaacccttg
ttgattgatgaagattattatgctcgtgtggagggtagagaaatcatttctaatctcagt
aaggctgctggtttggctactatgattgctgcaatgcgtcctgatattgacaacattgat
gaatatgttaggaatacaactgctagagcttttagtgttgttgcttctgcacttgggatt
cctgcacttctaccatttttgaaagctgtgtgtcagagtaagaagtcatggcaagctagg
catactgggatcaagattgttcagcagattgctattttgattggctgtgccgttcttcct
cacttaaagtccctagtagaaatcatagaacatggtttgaacgatgagaatcagaaggtg
aggactattactgctttgtctctggctgcccttgctgaggctgctgccccctatggcatt
gaaagctttgactcagttttaaaaccattgtggaagggtatcaggtctcatcgaggtaaa
gtattggctgcatttttgaaggccattggttttatcattcctttgatggatgcaatttat
gctagttactatacaaaagaagttatgttcattcttatccgtgagttccagtctcctgat
gaagaaatgaagaagattgtgctcaaggtggtgaagcaatgtgtgagcaccgagggtgtt
gaagctgattacatccggaatgatattctacccgagttcttcaggaatttctgggtgaga
aggatggctttagataggagaaactatcggcagcttgtggagacaacggttgagatggcc
aataaagtaggtgttgctgatattgtagggagaatagtggaggatctgaaggatgagagt
gaaccctacaggcgtatggtaatggaaacaattgagaaggtggttgcaaacttgggctca
tctgatattgatgccaggttggaggaacttttgattgatggtattctttatgctttccaa
gagcagaccagtgatgatgccaatgtgatgcttaatggatttggtgctgttgtgaattca
cttgggcacagagtgaaaccttatcttccccagatctgtggtaccataaaatggcgattg
aataacaagagtgccaaggtcaggcagcaggcagctgatcttatttcaagaattgctgtg
gttatgaaacagtgccaagaggaacaattgatgggccatcttggggttgttctatatgag
tatctcggtgaggagtaccctgaagttttgggatctattttaggagcccttaaggcaatt
gtcaatgttattggtatgacaaaaatgacgcctccaatcaaggatttgcttccaaggttg
acacctattctgaaaaataggcatgagaaggtccaggaaaactgcattgatctggttggc
cgtattgctgaccgaggtgcggagtttgtaccagctagggagtggatgaggatttgtttt
gagcttcttgagatgcttaaagctcacaagaagggtattcgaagagctactgtcaatact
ttcggatatattgctaaagccattggcccacaagatgtcttggccactctgttaaacaat
ctcaaagtacaagaacgccagaaccgtgtttgtactactgtggcgattgcaattgttgct
gaaacatgttctcctttcacagttttaccagcattgatgaatgagtaccgtgtgccagaa
cttaacgtgcagaatggtgtcttgaaatctctttccttcctgtttgagtatattggtgaa
atgggcaaagattacatctatgctgtgactccattacttgaggatgctctcatggataga
gatctggttcacaggcaaactgcagcctcagctgtgaagcacatggctttgggagtcgcc
gggttaggttgcgaggatgctttagtccacttgatgaactatgtttggcccaacatattt
gaaacttcacctcatgtcataaatgctgtcacggaggccattgaagggatgagggtagcc
ttaggtgctgcagtggtgctgaactattgtctgcagggtctgttccatcctgctcggaag
gttagggaagtatattggaagatatataattcactgtatattggagctcaagatgctcta
gttgcagcgtatcctattctagaggacgagcagagcagtgagcagaacaacatatacagt
aggccagagttaatgatgttcgtataa

DBGET integrated database retrieval system