Hibiscus syriacus (Rose-of-Sharon): 120114548
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Entry
120114548 CDS
T09559
Name
(RefSeq) ABC transporter F family member 1-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsyr03009
]
120114548
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
120114548
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Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
AAA_15
MMR_HSR1
AAA_14
AAA_22
RsgA_GTPase
AAA_30
AAA_16
VapE-like_dom
Zeta_toxin
Ig_F54D1_6_2
AAA_27
Motif
Other DBs
NCBI-GeneID:
120114548
NCBI-ProteinID:
XP_038991343
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MVSDASKKKAAQKKAAAAAKRGGKAAAAAASSKAVATATSENGVNKLSDKVSELQISDRT
CTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSTLELNYGRRYGLLGLNGCGKSTLLTAIG
LRELPIPDHMDIYHLTREIEASDMSSLDAVISCDEERLKLEKEAELLVEQDDGGGEQLER
IYERLEALDASTAEKRAAEILYGLGFNKKMQAMKTRDFSGGWRMRVALARALFINPTILL
LDEPTNHLDLEACVWLEENLKKFDRILVVVSHSQDFLNGVCTNIIHMQNKSLKLYTGNYD
QYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGL
TEKVVMDKVLVFRFVDVGKLPPPVLQFVEVAFGYTPDNLIYKNLDFGVDLDSRIALVGPN
GAGKSTMLKLMTGELTPTDGMVRRHNHLRIAQFHQHLAEKLDMEMSALQYMIKEYPGNEE
EKMRAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAFRQPHLLLLDEPTNHLDIETID
SLAEALNEWDGGMVLVSHDFRLINQVAEEIWVCENQAVTRWQGDIMDFKLHLKSKAGLSD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggtctcagacgccagtaagaaaaaggcagctcagaagaaggctgctgcggctgcaaag
agaggagggaaggcggctgcagccgctgcatcttccaaggcggtggcaaccgcgacgtcg
gagaacggtgttaataaactttctgataaagttagtgagctccagatatctgatcggaca
tgtactggtgttctctgctctcatcctctgtcaagagatattcgtatagagtccttatca
gttactttccatggacatgatcttattgttgattcaacattggaacttaactatggcagg
cgctatggtttgcttggattgaacggatgtgggaaatccacactgctgactgcaatagga
ttgcgtgaacttccgattccggatcacatggatatctatcatttgacgagggagattgaa
gcttcagacatgtcttctttggacgctgtcataagttgtgatgaagagaggttgaaattg
gagaaagaagcagaactgttggtagaacaggatgatggtggtggagagcaacttgaacgt
atttatgagcgattggaggcgttggatgcatcaactgctgagaaacgtgctgctgaaatc
ttatatggtcttggtttcaataagaagatgcaggcaatgaaaacacgagatttctctggt
ggctggagaatgagggttgcattagctcgggccctattcatcaatccgaccattcttttg
cttgatgaacccaccaatcatttagatttagaagcttgcgtctggttggaagaaaatttg
aagaaatttgatcgtatccttgttgtggtatcacattcccaggatttcctgaacggagtc
tgtacaaatattatccatatgcagaacaaaagccttaagctttacactgggaattatgat
cagtatgttcagactcgttctgagttggaagagaaccagatgaaacagtacaaatgggag
caggaacagattgcttcaatgaaggagtacattgctcgcttcggtcatgggtcagcaaaa
ctggcccgacaggcacagagtaaggaaaagacattggcaaagatggagcgaggtggactc
acagagaaggtagtcatggataaggttctggtctttcggtttgttgatgttggaaaactt
cctccaccagtactgcagtttgtggaagttgcttttggatatacacctgataatctcatc
tacaagaacttggactttggagtagacttggactcaaggatagcactagtaggacctaat
ggtgcagggaagagtacaatgttgaaactgatgactggtgaattgactcctactgacggt
atggtccgacggcataatcatctacgaattgcacaattccatcagcacttggcagagaaa
cttgacatggaaatgtctgcgctccaatatatgataaaagagtatcccggaaatgaggag
gagaaaatgagagcagcaattgggaagtttggattgtcggggaaagcacaagtgatgccg
atgaagaacctatccgatggacagaggagtcgggtaatctttgcatggttagcatttcga
caaccccacttactgctgctggatgagcccactaaccatttggatatagagacaattgat
tcgctggccgaagcattgaacgagtgggatggtgggatggtacttgtgagtcacgatttc
cggctgataaaccaggtggctgaggagatttgggtgtgtgaaaaccaagctgtaacacgg
tggcaaggtgatattatggacttcaagctgcatctgaagagtaaagctggtttatccgac
tga
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