Hibiscus syriacus (Rose-of-Sharon): 120114970
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Entry
120114970 CDS
T09559
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR17-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120114970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120114970
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120114970
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
120114970
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
120114970
RSF complex
120114970
WICH complex
120114970
B-WICH complex
120114970
NORC complex
120114970
BRF complex
120114970
NuRF complex (fruit fly)
120114970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
Myb_DNA-binding
HAND
HDA2-3
DEAD
DBINO
CHDII_SANT-like
AAA_14
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
120114970
NCBI-ProteinID:
XP_038991665
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MAKSKPASSDEELYNGSSSSEEEQVNDQVNVEEDDEEEIEAVARSAYSSDEDDDVVPDEN
ADDADDDESNGAEPEISKREKERLKEMQKLKKQKIQEILDAQNAAIDADMNNKGKGRLKY
LLQQTELFAHFAKGDPSSSQKKVKGRGRHASKITEEEEDEEYLKEEEDGLSGNTRLVTQP
SCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEYRGITGPHM
VVAPKSTLGNWMNEIHRFCPVLRAVKFLGNPEERRYIREELLVAGKFDVCVTSFEMAIKE
KSALRRFSWRYIIIDEAHRIKNENSILSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNF
LLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILK
VGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTG
DHLITNAGKMVLLDKLLQKLKERDSRVLIFSQMTRLLDILEDYLMFRGYQYCRIDGNTGG
DDRDASIDTFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHR
IGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFG
AEMVFSSKDSTITDEDIDRIIAKGEAATAELDAKMKKFTEDAIKFKMDDNAELYDFDDEK
DENKVDFKKIASENWIEPPKRERKRNYSESEYFKQTLRQGGPAKPKEPRIPRMPQLFDFQ
FFNTQRLSELYEKEVRYLMQTHQKNQVKDTIDVDEPEERGDPLTAEELEEKERLLEEGFS
SWSRRDFNAFIRACEKYGRNDMKSIASEMEGKTEEEVERYAKVFKERYKELNDYDRIIKN
IERGEARIARRDEIMKAISKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLG
YGNWEELKAAFRTSPLFRFDWFVKSRTTQELGRRCDTLIRLIEKENQEYDERERQARKEK
KLAKNITPSKRSGKQPAERETLNQLKKRKQLSLDDNGKKRK
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcgaagccggcgtcctccgatgaggaactgtacaacggttctagttcgtca
gaagaggagcaagtcaacgaccaggtcaacgttgaagaagacgatgaagaggagatcgaa
gctgttgctcgctccgcctactcctccgacgaagacgatgacgttgtccctgacgaaaac
gcggatgatgctgacgatgatgagtctaatggggctgaaccggaaattagtaagcgagaa
aaagagaggctaaaagaaatgcagaaactgaagaagcagaagattcaggagatattggat
gctcaaaatgctgccattgacgctgatatgaataataaggggaaagggaggttgaagtat
cttttgcaacagacggagttgtttgctcattttgctaaaggtgacccaagttcatcacaa
aagaaggtgaaaggaaggggtcgtcatgcatcaaaaataactgaggaggaagaagatgaa
gagtacctcaaggaggaagaagatggtttgtctgggaacacccgattggtgactcagcct
tcttgtattcagggaaagatgagggactaccaacttgctggtttaaactggcttatacga
ctgtatgagaatggtataaatggaattcttgcagatgaaatgggacttgggaaaactttg
caaacaatttccttattgggctatcttcacgagtaccgtggaataaccggcccccacatg
gttgttgccccaaaatctactcttggtaattggatgaacgaaattcatcgattttgtcca
gtcttgagagctgtaaagtttcttgggaatcctgaagaaagaagatatatccgtgaagag
ttactggttgctgggaagtttgatgtctgtgtcactagttttgaaatggccattaaggag
aagtctgccttgcgtcgttttagctggcgctatataattattgatgaagcccatcgaatc
aagaatgagaattcaatcctttcgaaaacaatgagactctacaatactaattaccgtctt
cttattacgggtactccactccagaataatctccatgagctttggtctcttcttaacttt
ttactgccggagattttcagttctgctgaaacttttgatgagtggtttcagatttctggt
gaaaatgaccagcaggaagttgttcaacaacttcacaaggttcttcgtccatttctcctc
cggagattgaaatccgatgttgaaaaagggttgcctcccaaaaaagaaactatcctgaaa
gtaggaatgtcccagatgcagaagcagtactacagagctttgttgcaaaaggatcttgaa
gttgttaatgctggtggagagcgtaagcgtcttcttaacattgcaatgcagctgcgtaaa
tgttgtaatcacccatatcttttccaaggtgctgaacctggaccaccatatactacagga
gaccatcttattaccaatgctggtaaaatggttctcctagacaagttgcttcaaaagctg
aaggagcgtgattctagggttctgatattttcacagatgacaaggctgctggatattcta
gaagattatttgatgtttcgtgggtaccagtattgtcggattgatggtaatacgggtggt
gatgatcgtgatgcttccattgacacctttaataagccaggaagtgagaaatttgttttc
ttgttatcaactagagccggaggccttggtattaatcttgctacagcagatgttgtcatc
ctttatgatagtgactggaatccacaagttgatttgcaagcacaggatcgtgctcataga
attggtcaaaagaaggaagttcaagtgttccgcttttgcacagagtatactattgaggaa
aaggtgatagagagggcctataagaagcttgcgctagatgctctggtcattcaacaggga
cgattagctgagcagaagactgttaacaaagatgagttgcttcaaatggtgaggtttgga
gctgaaatggtcttcagctccaaggatagcacaattacagatgaagacattgatagaatc
attgccaaaggagaagctgcaacggctgaacttgatgccaagatgaagaaatttaccgag
gatgcaattaaattcaagatggatgataatgctgaattgtatgattttgacgatgaaaag
gatgagaacaaggttgacttcaaaaagattgcgagtgaaaactggattgaacccccaaaa
agagagcggaagcggaattactcagaatctgagtactttaaacaaaccttgcgccaaggt
ggtccagcaaaaccgaaggagcctcgaattcctcgcatgcctcaactgtttgattttcaa
ttttttaacactcagaggctgagtgagttgtatgagaaagaagtacgctatctcatgcaa
acgcatcagaagaatcaggtaaaggacacaattgatgtggatgaacctgaagaacgggga
gacccattaactgctgaagagctggaagagaaggagcgactattagaagagggattttct
tcatggagtagaagagatttcaatgctttcatcagagcctgtgagaaatacggacgaaat
gatatgaagagtattgcttcagaaatggaagggaaaacagaggaggaagttgaaagatat
gctaaagtatttaaagaaagatacaaggagttaaatgattatgataggataattaagaac
attgagcgaggagaggcaagaatcgctagaagagatgaaatcatgaaagcaatcagcaag
aaattggaccggtacaagaatccatggctggaattgaagatccaatatggtcagaacaaa
gggaagctatataacgaagaatgtgatcgattcatgatatgcatggttcacaagcttggt
tatggtaattgggaggagttgaaggcagcattccgaacgtcacccttgttccgatttgat
tggtttgtaaagtcacggacaactcaagagctggggaggagatgtgatacccttatccga
ttgattgagaaggaaaaccaagaatatgatgagagggagcgacaagctcgcaaggagaag
aaattggccaagaacatcacaccatcaaagcgcagtgggaagcaaccggccgagagagag
actcttaatcaacttaagaaacggaagcagctgtccttggatgataatgggaagaagagg
aagtga
DBGET
integrated database retrieval system
