Hibiscus syriacus (Rose-of-Sharon): 120116025
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Entry
120116025 CDS
T09559
Name
(RefSeq) uncharacterized protein LOC120116025 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120116025
Membrane trafficking [BR:
hsyr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120116025
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
120116025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_VPS8
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_2nd
Synaptobrevin
Lgl_C
WDR55
Beta-prop_IFT140_1st
Beta-prop_Aladin
C2-set_2
Motif
Other DBs
NCBI-GeneID:
120116025
NCBI-ProteinID:
XP_038992533
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MFAKRLLQKADHHPQKNVQRGDLKSEDLDLRVAIHYGIPSTSSVLAFDPIQRLLAIGTLD
GRIKVIGGDGIEGLLISPKQLPYKYLEFIQNQGFLIGISNDNDIQVWNLEDRCLACCLPW
ESNITAFCLIGGSHFMYIGNEYGLLSVVKFDGEDGKLSHLPYNISANSLSEASELSVPDD
QPIVGILPQPHSSGDRVLIAYGNGLIILWDVSKSQSPFIGGGKDLQLKDAVDSDVQDDTS
EHHLQEKEISAICWASSDGSILAVGYIDGDILFWNTSVASSKGERNGQNKNVVKLQLSSA
ERRLPVIVLQWSSNNSSRNDYDNLLFIYGGDEIGSEEVLTVLSLEWSSGMDNVRCVGRVD
LTLTGSFADMILLPTPGPTGGNYKADLFVLTNPGQLHLYDGTNLSTLLSKKERKQFARPV
EFPMVIRTADPPKTVGKFSVLPTGGNSSKSLSELASIMKPGLTPNTTASTKWPLTGGVPT
QLSVSKDNSIDRLYIAGYRDGSVRIWDASYPILTLLFVLEGEVQGTDVAGSDAPVTTLDF
CWQTLNLAVGNECGVVRVYNLGNSNTTSFHYVTETKCEVQSCARGKGPECKAVFSLLKSP
VQALQFGNCGAKLAVGFGFGRVAMLDVSLPASLFVTDCVSSSSSPIISLSWLEFKNAHSH
VKSTEQSETEIAVKPEEEIIFILTKDAKIFSIDGANGEMIQPHPWNLKKEETALSMYIIA
SSFPVLNREKHLEESSKDITVKGEAELDASSTETEHPSSSETASTLDRSLDMLFLLCCQN
SLRLFSMKSLIQGKDKTIHKVNHTKPCCWTTTFMKDGRVCGLLLLFQTGDLEIRSLPDLE
LVKESSIKSILRWNYKANMDKLMTSDDAQLTLTSGCEVAFISLLAGSNDFRIPEALPCLH
DRVLAAAADAAINFSSNQKKKQVMASGILGGMVKGFKGGKVNTSATPESDFSLLESKFLK
TPFIDAMQKVNKQEDIELDIDDIDIDETLPVTSSSSHEAVKSKGGKETDREKLLGAQDDS
TPRVRTAQEIIAKYRKTGDASSAASHARDKLAERGEKLQRISRRTEELQSGAENFASLAD
ELVKAMENRKWWQV
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctaaacgcttgcttcagaaagcggatcaccatcctcagaaaaatgtgcagcgt
ggggatttgaaatcagaagatttggatttgcgagttgctatccactatgggatcccctct
acttcatctgttcttgcttttgatcctattcagcgcctcttggctatcgggactttagat
ggacggattaaagttattggtggtgatggaattgagggacttctcatatctcccaagcaa
ttgccttacaaatatttagagttcatacaaaaccaaggctttttaatcggcatctcaaat
gacaatgatattcaggtttggaatctggaggacaggtgtctagcatgttgtttaccgtgg
gaatccaacattactgccttctgtctcattggtggctcacatttcatgtatattggaaat
gagtatggtttgctctcggtggttaagttcgatggtgaagatggaaaactttcgcactta
ccctacaatatatcagcaaattctttgagtgaagcatctgaactttcagttcctgatgac
caacctattgttgggattcttcctcaaccccattcttctggagatagagtcttaattgca
tatggaaatggtttgataattctttgggatgtttctaaatctcaaagtccctttattgga
ggaggaaaggatcttcagttaaaggatgcagtggattcagatgtccaagatgatacatct
gagcatcatctccaagaaaaggaaataagtgctatttgttgggcatcttctgatggatcc
attctcgctgtgggttacatagatggggatatcttgttttggaatacaagtgttgcctct
tctaaaggagaacggaatggacaaaacaaaaatgttgttaagctgcaactgtcatctgct
gagaggagacttcctgtcattgtcttgcaatggtcctcaaacaatagttcacgcaatgat
tatgataacctacttttcatctatggtggtgatgaaataggatctgaagaagtcttgaca
gttttgagtcttgaatggtcatctgggatggacaatgttagatgtgttggtcgtgtggat
cttacattgactggctcttttgctgacatgatcttattgccaactcctgggccaacggga
ggcaattacaaagctgacctttttgtgttgacaaaccctggacaattgcatctttacgat
ggtacgaacttgtctaccttgctatctaagaaagagaggaaacaatttgcccgtcctgtg
gaatttccgatggtaatacgaacagctgacccaccaaagaccgttggaaagttcagtgtg
ctaccaactggtggaaactcgtcaaaatctctttcagagcttgcatcaataatgaaacca
ggcttaacaccaaatacaactgccagtacaaagtggcccttgacagggggtgtacccact
caactatctgtctctaaagataacagtattgaccgattgtacattgccggctaccgggat
ggatcggttcggatatgggatgcatcttatcctatactgacacttctctttgtcctagaa
ggagaagtgcaaggtacggatgtggctggttccgatgctccagtgacaaccctggacttt
tgttggcagaccttaaatttggctgttggaaatgaatgcggtgtggtacgcgtttataac
cttggcaactccaatacaacaagctttcactatgtcactgagaccaaatgtgaagttcag
agttgtgcacgaggaaaaggacctgagtgtaaagctgtattttcccttctcaaatcacct
gttcaagccctgcagttcgggaattgtggagccaagctagctgttggattcggatttggt
cgtgttgcgatgcttgatgtgagtttgccagcaagtttgtttgttactgactgtgtttct
agctcgtcatctccgatcatttcattgtcttggttagagtttaaaaatgctcatagccat
gtaaaaagcacagagcaatcagaaacagagattgcagtcaaacctgaagaggaaataata
tttatcttaaccaaggatgcaaaaattttctctattgacggtgccaatggtgagatgata
caacctcatccatggaacttgaaaaaggaagaaactgcactctccatgtacattatagcg
agcagttttccagtattaaaccgtgagaagcatctggaggaatccagcaaggatatcact
gtcaagggtgaggctgagcttgatgcttcttcaactgagaccgaacatccctcctcatcg
gaaactgcttccactctggatcgctcacttgatatgctctttttgctttgttgtcaaaat
tcattgcggttgttctccatgaagtccttgattcaggggaaggataaaacaattcataag
gtaaatcatacgaaaccttgctgttggaccactacttttatgaaagacggaagagtttgc
ggactgctcttgctgtttcaaacaggggatctcgagatcagatccttgccggacttggaa
ttggttaaagaaagctccataaagtcgatcctacggtggaactacaaggcaaacatggat
aagttgatgacttctgatgatgctcaacttacactgacgagtggatgcgaagtggccttc
atttctctcttggccggttcaaatgatttcaggatccccgaagcgctgccttgtctccat
gatcgggttcttgcagcagctgccgatgctgccattaatttctcttcaaatcaaaagaag
aaacaggttatggcatcggggattcttggtggtatggtcaaaggctttaaaggaggaaaa
gtaaatacatctgcaacacccgaatctgatttttctcttctagagagcaaatttttaaag
actccattcatagatgcaatgcagaaagttaataagcaggaagatattgagcttgacata
gatgacatcgacatagatgaaactctacctgtgactagctcctcgtctcatgaagccgtt
aaatcgaaaggaggaaaggaaacagaccgagaaaaattactaggtgcacaagatgattca
acacccagagttcgaaccgcccaagaaattattgcgaaatatagaaaaactggggatgct
tcttctgcagcatcacatgcaagagataaactggcagagaggggggaaaagctgcagaga
atcagcaggcgcaccgaagagctgcaaagcggggctgaaaactttgcatcgttagcagat
gaacttgtcaaggcaatggaaaatcgaaaatggtggcaggtataa
DBGET
integrated database retrieval system
