Hibiscus syriacus (Rose-of-Sharon): 120116239
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Entry
120116239 CDS
T09559
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsyr01009
]
120116239
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120116239
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120116239
Protein phosphatases and associated proteins [BR:
hsyr01009
]
HAD phosphatases
Fcp/Scp phosphatases
120116239
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120116239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
120116239
NCBI-ProteinID:
XP_038992711
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MAKDQSISVSEAVHKIQLHLLDGIQGEKQLFCSGSLISRSDYEDVVTERSISNTCGYPLC
PNPLPSEPLRRGRYRISLKEHRVYDLQETSRFCSSDCLINSRAFSGSLQEERCSALNHAK
LNAILNLFDDVDLGEKVLGKNGDLGFSNLRIKENEETKAGEVSSVGPSNAIEGYVPQREL
VSKPSPSKSTKNGVFDSSSSKIGNSKGDSVFNNEIEFTSTIIMNNEYTISKNPGSHRQGQ
RMKPSSTNNVINGMDFTSEIIMNDEYTVSKTPPGSRQGCSGLKLKEVERGGVCKYFEEKC
MISESSSPLREKDSSIVELSSTSCVYQSDLGIIGTEAEKETCADKSVASSEVVLKSSLKS
AGRKKLNRSVTWADDKNVGNAQKDNLCEVKEMDTQKGDSEMCGRAEDGDDDKMLRFASAE
ACAVALSKAAAAVASGDSDANDAVSEAGLIILPFPIEADKEERGRNVDTLEPEAESEPEG
GPVKWPAKPGIPRSDFFDPEDSWFDAPPEGFSLTLSTFATMWNALFEWITSSSLAYIYGR
DETFHEEYLSVNGREYPQKIVLRDGRSSEIKETLAGCISRALPAIVTALRLPIPISTLEQ
GMGRLLETMSFVEALPAFRMKQWQVIVLLFIDALSVCRIPALTPHLTNGRMLLHKVLDGA
QISMEEYEVMKDLIIPLGRAPDFSAQSGA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagatcagtcaatctccgtgtcagaagccgtacacaagattcaactccacctg
ctcgacggtatccaaggcgagaaacaactgttctgctccggttccttaatttcccgaagc
gactacgaggatgtcgtaaccgagaggtcgatttccaacacctgcggttatcctctctgc
ccaaaccccttaccttccgaaccccttcgaagaggccgttatcgaatctctttgaaagaa
cacagagtttacgatttacaagaaaccagcaggttttgctcctccgattgcctgatcaat
agtagagctttctctgggagtttacaagaagagaggtgttccgctttgaatcatgcgaaa
cttaatgcgattttgaatttgtttgatgacgtggatttgggcgagaaggttttggggaag
aatggggatttagggttttccaatttgaggattaaagagaatgaggaaacaaaagccggg
gaagtttcatctgtgggtccttccaatgctattgaaggctatgtcccacaaagagaattg
gtttctaagccttcaccttcaaagagcaccaaaaatggagtgtttgattctagtagctcc
aagattggtaatagcaaaggagattctgtttttaataatgagatagaattcactagtact
ataattatgaacaatgaatataccatttctaagaatcctggcagtcatagacagggtcaa
agaatgaagcctagcagcacgaataatgttattaatgggatggactttactagtgaaata
atcatgaatgatgaatatactgtttccaagacacccccagggtcaagacagggttgttca
ggtttaaaattgaaagaagtggaacgaggaggagtttgtaaatactttgaggaaaaatgt
atgatatcagaatcctcgtctcctttgagggaaaaagattctagcattgtagaactgtct
tcgactagttgtgtctatcagagtgatttgggcataattggtactgaagcagagaaggaa
acctgtgctgacaagtctgtggcatcaagtgaggttgtgcttaagtcctcccttaaatct
gccggacgaaagaaacttaatcgctcagttacttgggctgatgataaaaatgttggcaat
gctcagaaagacaatctttgtgaagttaaagaaatggatactcagaaaggagattctgaa
atgtgtggcagagcagaagatggtgatgatgataaaatgttacgatttgcatctgcggaa
gcttgtgctgtggcattgagcaaggcggcagcagctgtggcatctggagattccgatgcc
aatgatgctgtttctgaagctgggcttatcatattgccatttcctattgaggcggacaag
gaggagagagggaggaatgttgatacacttgaaccagaagcagaatctgaaccagaaggc
ggccctgtaaagtggccagcaaaacctgggattccacgctctgatttttttgacccagaa
gactcttggtttgatgctccaccagagggtttcagtttaaccctgtcaacttttgcaacg
atgtggaacgcactttttgaatggataacatcgtcttctttagcttatatatatgggaga
gatgaaactttccatgaagagtacctctctgttaatgggagggagtatccgcagaagatt
gtcttacgagatggtcgttcttctgaaattaaagaaactcttgctggctgtatttctcgt
gctttgcctgctattgtaactgctctcagactgcctatacctatatctactttggagcaa
ggaatggggcgcctgctagaaacaatgtcatttgtggaagcacttccagcattcagaatg
aaacagtggcaagtaattgttcttctatttattgatgctctttctgtatgtagaatacct
gccctcactccgcacttgactaatgggaggatgcttcttcacaaggtgctggatggtgcc
cagattagtatggaagagtatgaggttatgaaagatctcataataccacttggccgagca
cctgacttctctgctcagagtggtgcttga
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