Hibiscus syriacus (Rose-of-Sharon): 120116270
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Entry
120116270 CDS
T09559
Name
(RefSeq) protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120116270
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120116270
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120116270
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120116270
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
120116270
microRNA pathway
RISC loading complex
120116270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
120116270
NCBI-ProteinID:
XP_038992730
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MELFEKDGNGDVPESLPPPPPVPPDVVPIKAESEPAKKKVVRVPMARRGLGSKGQKITLL
TNHFKVNVGSVDGYFFHYCVSLSYEDGRPVDGKGVGRKVIDRVQETYSNELAGKDFAYDG
EKSLFTVGPLPNNKLEFTVILEDVTSNRNKGNASPNGHESPNAHDRKRIKRSYQSKTFKV
EISFAAKIPMQAIQNALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFQNNPDNF
TDIGGGVLGCRGFHSSFRASQGGLSLNIDVSTTMIIRPGPVVDFLIANQNARDPYSLDWT
KAKRTLKNLRIKVGPSNQEYKITGLSEQMCKDQLFSLKQKSAKNDNGEAENLEITVYDYF
VNHRNIELRYSADLPCINVGKPKRPTYIPLELCSLVSLQRYTKALTTFQRASLVEKSRQK
PQERMTVLSSALQRSNYGAEPMLRSCGVSISTNFTQVEGRVLPAPRLKVGNGEDFFPRNG
RWNFNNKKLVEPTKIERWAVVNFSARCDTNSLVRDLIRCGDMKGIRIDHPFDVFQESNQN
RRCSPIVRVDKMFEDIQSKLPGAPQFLLCVLPDKKNSDLYGPWKKKNLAEFGIVTQCMAP
TRVNDQYLTNLLLKINAKLGGLNSMLAIEQTTSIPVVSKVPTIILGMDVSHGSPGQSDIP
SIAAVVSSRQWPLISRYRASVRTQSPKLEMIDSLFKRVSDKEDEGIFREVLLDFYTSSGK
RKPDQIIIFRDGVSESQFNQVLNIELDQVIEACKFLDESWNPKFVVIVAQKNHHTKFFQQ
GSPDNVPPGTVIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLLDQIGFSADDLQELVH
SLSYVYQRSTTAISVVAPICYAHLAASQVGTFMKFEDASETSSSHGGVTAPGVVAVPQLP
RLNEKVCSSMFFC
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggaattgtttgagaaagatggaaatggggatgtgcctgagtctctgccacctccccca
cctgtgcctcctgatgttgtacctatcaaagcagaatctgaacctgcaaaaaagaaggtt
gtgcgagtcccaatggccaggcgtggtcttgggtctaaaggacagaagataactcttcta
accaatcacttcaaagtgaatgttggaagtgttgatggatatttcttccactactgtgtt
tctctatcttatgaagatggtcgtcctgtcgatggaaaaggtgttggaagaaaagtgata
gatagggtgcaagaaacctatagcaatgagctggctggaaaggattttgcttatgatgga
gagaagagtttatttactgttggtcctctcccaaataacaagcttgagtttacagttata
cttgaagatgttacatccaacagaaacaaagggaatgcaagtcctaatggccatgagagt
ccaaatgctcacgacaggaagagaattaaacggtcttatcagtcaaaaacctttaaagtg
gagattagctttgctgcaaagattcccatgcaggccattcaaaatgctctgcgtggacag
gaatcagagaactcacaagaagccttaagggtgttggatatcattttacggcagcatgct
gcaaaacagggatgccttcttgttcgccaatctttctttcaaaacaatcctgacaatttt
acagacattggtggaggtgtcctaggctgcagagggttccattctagttttcgagcctca
caaggaggcctttccctgaacattgatgtatcaactaccatgataattcgacctggtcca
gtcgtggattttttaattgccaatcagaatgccagagatccttactccctggactggacc
aaggctaaacgaactcttaagaatctgaggataaaagtcggtccatccaatcaagagtac
aagattactggattgagcgaacaaatgtgcaaagatcagttgttttcattgaagcaaaaa
agtgcgaagaatgataatggtgaagctgagaatctagagattactgtttatgattatttt
gtcaaccatcgcaacatagagttgcgttattctgcagacctgccgtgcattaatgttgga
aagccaaaacggccaacgtatattcctttggagctgtgttccctggtgtctttgcaacgt
tacacaaaagcactaaccacttttcagagagcttcactggttgaaaaatcaagacagaag
cctcaggaaagaatgactgtcttgtctagtgctttacagaggagtaattatggtgctgag
ccaatgctgcgttcatgtggcgtttctatcagcactaatttcacccaagtcgaaggtcgt
gttctgcctgcaccaaggttaaaagtcgggaatggtgaagatttctttccacggaatggt
cggtggaattttaacaacaagaaactagtggagccaactaagattgaacgatgggctgtt
gttaacttctcagcacgatgtgatacaaatagccttgttcgagatttgattagatgtgga
gacatgaaaggaattaggatagaccatccttttgatgtgtttcaagagtcaaatcagaac
agacgctgctctcctattgttagagtggataaaatgtttgaggacatccaatctaaactt
cctggagctccacagttcctcctttgtgttttacctgataagaaaaattctgatctttat
ggtccatggaagaagaagaatcttgccgagtttggcatagtcacgcagtgtatggctcca
actagggtcaatgatcagtaccttacgaatctgcttctaaaaatcaatgcaaagcttgga
ggactgaattctatgttagcaattgagcaaacaacttcaattccggttgtttctaaggtc
ccaaccatcatccttggcatggatgtgtctcatggctcccctgggcagtctgatattcca
tcaattgctgcggtggtcagctccaggcagtggcctttgatttcccgctacagggcatct
gtgcggacacagtcacctaagcttgaaatgatagattctctgttcaaacgagtgtctgac
aaggaggatgagggtatctttagggaggttctcttggacttctatacaagttcaggaaag
cgaaagcctgatcaaatcataattttcagggatggggttagtgagtcacagttcaatcaa
gttttgaacattgaactggatcaagtcattgaggcttgcaaatttcttgacgagagttgg
aaccccaagtttgtggtcatcgttgcacagaaaaaccatcatacaaagttcttccagcag
ggatctcctgacaatgtcccacctggcactgttatagacaacaaaatctgtcatccaaag
aacaatgacttctatctttgtgctcatgcgggaatgattggaaccacgaggcctacccat
tatcatgttttgttagatcagattgggttttcggctgatgatctccaggaacttgttcat
tctctgtcatatgtttaccaaaggagcaccactgccatttctgtagttgctccaatctgc
tacgcacatttggcagcctcacaggttggaacgttcatgaagtttgaagatgcatcggag
acgtcgtcaagccatggtggggttacggcaccaggagttgttgctgtccctcagctgcct
aggttgaatgagaaagtctgcagctcaatgttcttctgttga
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