KEGG   Hibiscus syriacus (Rose-of-Sharon): 120116271
Entry
120116271         CDS       T09559                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120116271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120116271
   03041 Spliceosome [BR:hsyr03041]
    120116271
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     120116271
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120116271
Spliceosome [BR:hsyr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    120116271
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8 RNA_pol_3_Rpc31
Other DBs
NCBI-GeneID: 120116271
NCBI-ProteinID: XP_038992731
LinkDB
Position
Unknown
AA seq 531 aa
MLIDSFDFQTLAIPSKLIIKILIFFSSMAKKRKQRSSEPRPTKTTSDPQPIQQEQQEQQE
QQEQPPYISDENLNPELGEEQHLQEVEEEVEVEEEVEVEVEVEEEVEVEEDEEEEEDDDD
EGERAPNQTLVGSSIASIQNGAPKGTDQEEELDDEPFEKLLEPFGKDQLITLIKKAVYKH
PEFISSVREFADADPAHRKIFVHGLSWDTTAETLTAEFTKYGEIEECKAVTDRVSGKSKG
YAFILFKHRSGARRALKQPQKKIGNRITSCQLASQGPVPAPPPNAPPASEYTQKKIFVSN
VSAELDPEKLLEFFRQYGEIEEGPLGLDKQTGKPKGFALFVYRSAESARKALEEPHKNFE
SHVLHCQKAIDGPKLTKGGYGGGTSGGHHQEYHQHQQGAHQIQSHYHHAKKGKYSTSGSD
TGHLMAPSGPTAVGFNPGVAATGFNPAAAPALNPALGQALTALLSGQGGLGLGNLLGGFS
GAPVNQGAPSAGYGNQVAGGYGVQGGYQNPQMGQGGAGRNQPGGSAPYMGH
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgttgatagactccttcgacttccaaaccctagcaattccttcaaaactcataataaaa
atcctaattttcttttcatccatggcaaaaaagcgaaagcaacgatcctctgaaccccga
cccaccaaaaccacctcagatcctcaaccaattcaacaagaacagcaagaacagcaagaa
cagcaagaacagcccccgtatatatccgacgaaaacctgaacccggaactaggcgaggag
cagcatctacaggaagtggaagaggaggtagaagttgaagaagaagtagaagtagaagta
gaagtagaagaggaagttgaagttgaagaagacgaggaggaagaagaagatgatgatgac
gaaggcgaacgagctccaaaccaaaccctagttggttcctctatcgcctccattcaaaat
ggagcccctaagggaacggatcaggaagaagaattggatgacgagccgttcgagaaactt
ctagagccattcgggaaagatcaattgattacccttattaagaaagcggtttataaacac
ccggaatttatctcgtccgttcgggagttcgccgatgcagacccggcccacaggaagatc
ttcgttcatgggttaagttgggataccactgctgaaaccctcactgcagagtttactaaa
tatggggaaattgaagaatgcaaagctgttaccgatagggtttctgggaaatccaaaggt
tacgcttttattctattcaagcatcggagcggggcacgccgggctttgaaacaaccccag
aagaagattgggaatagaattacttcttgccagttggcttcacaagggccggttcctgca
cctcctccgaatgctccacctgcttctgagtatactcaaaagaagatttttgttagcaat
gtgtcagctgaattggacccagagaagttgctagagttttttagacagtatggtgaaatt
gaggaaggtccattggggcttgataagcagacagggaaaccaaaggggtttgcccttttt
gtatacaggtcggctgaaagtgccaggaaagcattggaggagcctcataaaaattttgaa
agtcatgttttgcattgccaaaaagccattgacgggccgaaattgactaaaggtggttat
ggaggaggtacttctggtgggcatcatcaggagtaccaccagcaccagcaaggagcacat
cagattcagtctcattaccaccatgctaagaagggaaagtattcgacctctggatcagac
actggtcatttgatggctccatctggtcctactgcagtggggttcaaccctggagttgct
gctactggctttaaccctgctgctgcacctgctttaaacccagcacttggacaggctttg
actgcattgctttctggacaggggggcttggggcttggtaatctgcttggagggtttagt
ggtgcccctgtcaaccaaggagcacccagtgcaggctatgggaatcaggttgctggaggc
tatggagtgcagggtggatatcaaaacccacagatgggtcagggtggtgctggtaggaat
caacccggtggcagtgctccttacatgggacattag

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