Hibiscus syriacus (Rose-of-Sharon): 120116289
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Entry
120116289 CDS
T09559
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120116289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120116289
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120116289
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
U-box type E3
120116289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
U-box
HEAT_2
zf-RING_UBOX
MLKL_N
Neurochondrin
zf-C3HC4_4
Arm_2
zf-Nse
KAP
zf-C3HC4_2
MCAfunc
zf-C3HC4
HEAT_EF3_GNC1
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
120116289
NCBI-ProteinID:
XP_038992745
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MEEEKGELVQSLIDAVNQIASISDYRCSIKKEYCNLARRLKLLTPMFEEIRDSKEIISEE
TVKALVSLKEALVSAKELLRFGSEGSKIYLVLEREQIMHKFLEVTAQLEEALSGISYENL
DISDEVKEQVELVLAQFRRAKGRVDAPDVDLYEDLLSSYNKSDDAALDPDVLRRLAKKLQ
LVGIAELTQESLALHEMVSASGGDPGETFEKMSNLLKEIKDFIQTENPNLDAPSREKNLP
PSSSGQATTDGNHKTPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEQGHGTCP
KTQQTLSSSSLTPNYVLRSLIAQWCEANGIEPPKRPSSSRPSKTTSACSPAEHAKIEVLL
HKLASGNPEDQRMAACEIRLLAKRNANNRVAIAEAGAIPLLVSLLSTHDSRIQEHAVTAL
LNLSICEDNKGSIISYGAVPGIVQVLKKGSMEARENAAAALFSLSVVDENKVTIGASGAI
PPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLREPGGGMVDEAL
AILAMLGSHPEGKSAIGAAEAVPVLVDVIGNGSPRNRENAAAVLVHLCAGDQQHLAEAQE
LGVMDPLLDLAQNGTDRGKRKATQLLERMSRLVERQKLALAQPDSQAPQPPSQSPTQQ
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaaaggagagctggtgcagagcttgatcgatgcggtgaaccaaatagct
tcaatcagcgactacagatgctccatcaagaaggagtactgtaatctcgctaggagactc
aagcttctgacgccaatgttcgaggagattagagatagcaaagagataatttctgaagaa
actgttaaagctttggtctcgttgaaagaagctctcgtttcggcgaaggagcttctcaga
ttcggcagtgaaggcagcaagatttacctggttctagagagggagcagatcatgcataaa
tttcttgaagtgacagctcaattggaggaggctttgagtggaatttcctatgagaatctt
gacatatcagatgaagtaaaggaacaggtggagcttgtactagctcagttcaggagagct
aaaggaagagttgatgcacctgatgttgatctgtacgaggatctattatcatcatacaac
aaaagcgatgatgcagcactagatccagatgtacttaggagattggctaagaagttacag
ttggtggggatagctgaacttactcaagaatcgcttgctctacatgagatggtttctgcc
agtggtggagatcctggtgaaacatttgagaagatgtcaaatttattaaaggaaatcaag
gactttatacagacagaaaatcctaacctggacgctccttcaagagaaaagaatcttcct
ccaagtagcagtgggcaagcaactactgatggaaatcacaagactccagttatacctgat
gatttccgctgtccaatatccctggaattgatgaaggatccagtcattgtttcaactggg
cagacttatgaacgttcttgcattgagaaatggctggagcaggggcatggaacatgtcca
aagacacaacagacgctcagtagctcttcccttacacctaattatgtattgcgtagtcta
atagctcaatggtgtgaggcaaatggtattgaaccacccaaaagacctagtagttctcga
cccagtaaaactacatctgcctgctcgcctgctgaacatgctaagattgaagttctcctt
cataagcttgcatccggcaatcctgaagaccagagaatggctgcatgtgaaatccgactt
cttgccaaacgcaatgcaaataatcgtgtggccattgctgaagctggggccatacctctc
cttgtgagccttctttcaactcatgactcacgtatccaagaacatgctgtaacagcactt
cttaacctttctatttgtgaagataacaaaggaagtatcatatcctatggagcagttcct
ggtatcgtccaggtgcttaagaaggggagcatggaagctagagagaatgcagcagccgct
ctcttcagcctttcagtagtggatgaaaacaaggtgacaattggtgcctcgggtgcaatc
cctccattagtgacactgctaagtgaaggcacacaaaggggtaaaaaggacgctgcaaca
gcactcttcaacttgtgcatttaccaagggaacaagggaaaagcagtgagggctggtgtt
gtgcctacattaatgcgtttgttgagagaaccaggaggtggaatggtggatgaagcattg
gctatactagcaatgcttggaagccatcctgaagggaagtctgccattggagcagcagag
gcagtgccagttttggtagatgttattggaaatggatccccgaggaacagagagaatgca
gctgcagtgttggtgcacctttgtgccggagaccaacaacatttagcagaggcccaggaa
ctaggagttatggaccctttgctagacttggcacaaaatggtacagataggggtaagcgc
aaggctactcagttgttagagcgcatgagcaggcttgtggagcggcaaaaactggcacta
gcacaacctgattcccaagcaccgcagcccccgtctcaatctccgactcaacagtga
DBGET
integrated database retrieval system
