Hibiscus syriacus (Rose-of-Sharon): 120116944
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Entry
120116944 CDS
T09559
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120116944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120116944
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120116944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
KwaB
PrmA
Motif
Other DBs
NCBI-GeneID:
120116944
NCBI-ProteinID:
XP_038993250
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MASEQDMSSWTDLLHSSSKLLEQAAPSAQFPPLQRNLDQLEALSKKLKAKTLRTEAPSQS
IAATRLLAREGINAEQLTRDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEA
QKDNLRSFNDYMMKVLEEDWQKEKRDFLQSLNRISTLPKANMIDKSISGSHSAQIVSMAS
SSLVSSGPSGMELVPLASKPVVEKKMSVYAEVVRNLNNARQKGLPYKPATAFKAAYESLG
TEASGGKSVNMQKMWHLIQALMGEDSTMQRSVSRKMSLVIGARNHLEWGHEKYIMDTLQS
HPAQAALGGAVGNLHRVRAFLRIRLRDYGILDFDAGDAQRQPPVDTTWQQIYFCLRSGYY
DEARQIALSSRASHQFAPLLTEWINNGGMVPADIAVAAAEECEKMFRMGDRVGRAAYDKK
KMLLYAIISGSRRHIDRLLRELPSLFSTIEDFLWFILAAVRDLPGGTSSVIMNEGLLPYS
LDDLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLISAILYLSKVGDEEYNIDAVHIAI
VLADNGVLSDGAGAGQKPGVMDVYAEASSIIKQYGSMHLRIGNLEMTLEYYALAAAAVGG
GHVSWTGRGSMDQQRQRNLMLKQLLTELLLRDGGIYFLLGSRGAGEEGELGRFLTDHKSR
QQFLLEAAHQCQEAGLYDKSIEIQKRIGAFSMALDTINKCLSEAICALTRGRLDGESRTA
GLIHSGNEILETFKYYPEVSLQERENVLEQQTVLRQLEAILSIHKLTRLGQYLDALREVA
RLPFLPLYPRAPDITPDVFQNLSHHVQACVPDLLKVALTCLDNVTDTDGSLRAMRSKIAT
FLANNLHQNWPRDLYEKVARSL
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgagcaagacatgagcagctggaccgatcttctccactcttcctccaagctt
ctcgagcaagctgctccttctgctcagtttcctcctctccagagaaacttggatcaatta
gaagcactatcaaagaaactcaaggcaaaaaccttaagaactgaggctccttcccaatct
attgctgccacacggttacttgcacgtgagggaatcaatgctgagcagcttacacgcgat
ctgaagtcttttgaattgaagaccacgtttgaggatgttttccctgctgaagcaacaagt
gttgaggagtatctgcagcaggttcatgagatggcaatggtttcggccatccaagaagct
caaaaagataacctccgaagttttaatgattatatgatgaaagtgttggaggaagactgg
caaaaagaaaaacgtgacttcttacagagcttgaacaggatttcaacattgcctaaggct
aacatgattgataaaagcattagtggttctcattctgcgcaaatagtttccatggcttct
agttctctggtttcatcaggtccttctggcatggagcttgtacctttagctagcaagcca
gttgtcgagaaaaaaatgtcagtatatgctgaagttgttagaaatttgaacaatgcaaga
caaaagggcttgccatataaacctgccacagcttttaaggctgcttatgagagtttgggt
actgaagcatctggtggcaaatcagttaacatgcagaaaatgtggcatcttattcaggca
ttaatgggtgaggattcaacaatgcaacggagtgtctcaagaaagatgtcattagtaatt
ggtgcgaggaatcacctggaatggggacatgagaaatacattatggatacattacaaagc
catcctgcgcaagctgctcttggtggagctgttggaaatttgcatagagttcgtgccttt
ctccggattcgtttgagggattatggaattttggattttgatgctggtgatgctcaaagg
cagcctcctgttgatactacttggcaacagatttacttttgcttgaggtctggttattat
gatgaagcaagacaaattgccctctcgtcccgtgcatctcatcagtttgctccactgctt
acggagtggattaacaatggaggcatggttccagcggatattgcagttgctgctgcagaa
gagtgtgaaaaaatgttcagaatgggcgatcgggttggtcgggctgcatatgataagaaa
aaaatgttgctctatgctatcatatctggttctcgcaggcatattgaccgtctcctcaga
gagctaccgtcgctttttagtactatagaggatttcctgtggttcatattggctgcagta
cgtgaccttcctggtggaacctcgtcagtcattatgaatgagggtttattaccatacagt
ctggatgatttgcaagcttacctaaacaaattcgagccatcatattacacaaaaaatgga
aaggaccctctagtatacccgtatgtcttgcttttaagtatccagttgatatcagctatt
ttgtatttgtcaaaagtaggtgatgaagaatacaacattgatgctgtccacatagcaatt
gtgctagcagacaatggtgtcctctctgatggtgctggagctgggcaaaaacctggggtg
atggatgtttacgccgaagcatccagcattattaagcagtatggctctatgcacctacgg
attggtaacctcgaaatgactctagaatattatgcgctagctgctgctgcagtgggcggt
gggcatgtgtcatggactgggagaggcagtatggatcagcaaaggcagaggaacttaatg
ctgaagcagcttcttactgagctattgttacgagatggtgggatctattttttacttggt
tcaagaggtgctggagaggaaggtgaactggggcgatttttgactgatcataaatcaaga
caacagtttctacttgaagctgcacaccagtgtcaagaggcagggctgtatgacaaatct
atagagattcagaagagaattggggcattttctatggcgttggatacaataaataagtgc
ctatccgaagcaatttgtgctctaacgcgtggtagattggatggcgagagtcgaactgcg
ggtctcattcattctggaaatgagatcttggagactttcaaatattatcctgaagtcagt
cttcaagagagggaaaatgttttggagcagcaaactgtattgcggcagcttgaggcaata
ctatctatccacaagttgacaagactgggccagtaccttgatgctctaagggaagttgcc
aggcttccattccttccattgtatccacgagcacccgatattactcctgatgtgtttcag
aatttgtcccatcatgtccaagcttgtgtgccggacttgctaaaggtcgctctaacttgt
ttggacaatgtgaccgatacagatgggtcacttcgtgcgatgagatcaaagattgcaacc
ttccttgctaataatctgcatcagaattggccacgtgatttatacgaaaaggttgcaaga
agcttgtaa
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