Hibiscus syriacus (Rose-of-Sharon): 120116986
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Entry
120116986 CDS
T09559
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120116986
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120116986
Spliceosome [BR:
hsyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120116986
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
120116986
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
HAT_Syf1_CNRKL1_C
TPR_14
HAT_Syf1_M
ARM_TT21_5th
RRM_11
RRM_RdRP1_2
IgD_del_linker
Motif
Other DBs
NCBI-GeneID:
120116986
NCBI-ProteinID:
XP_038993279
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MEAFEKSPVGQDTGMDESDTVENPKTSLKSSSDSEDESDQKEKLLTLEYELSTNPSNYDA
HVQYINLLRRSGEIEKLREARENMNTSFPLSPEMWIEWAKDEASLLNDSNFESVEKLYQR
GIFEYLSIPLWCEYLNYVQRHDKKVCDCSADGISKARNLFERAVTAAALHVSQGSLIWDA
YTQFEQAILLTIDQSDIQAKEKQVQRIRSIFHRHLSIPHANLESTLLAYKAWEVEQGNSL
DAESGNVFGISSHVASAYQKAEEMYNARAHLEDQITRQDVSESERFQHYMSYLDFEKSCG
DPARVQILYERGITDFPVSSDLWLHYTRYLDKTLKAGNVVKDVYSRDTRSCPWVGELWVR
YLLCLERGLDSEKEISAAFEKSLKCTFSTLEKYLDLFLTRVDGLRRRISSDSGDDSLNLS
IIRETFQQAADYLSPHMKNTVGFLHLHAYWARLELKLGNDLNAARGVWESLLKSCGSILE
AWQSYILMEIELDHINEARAIYKRCYSKRFSGTGSEDICHSWLRFEREFGTLEELNHAEQ
KVTPRLEELQLFRLQQESKCLTGATDQREQTLKNTVREKRKSGSSAIDDHSPAKQQKHTS
QNKKLHKRENTQGLNLTEVNDGEEKKGKVEEQVNEKQMKDTNPTKPRIYTDQCTAFVSNL
SITAKDEDLLQFFNDVGGVTAIRVLLDKFTGKSRGLAYVDFEDDEHLAAAVAKNKQMLLG
KKLSIARSNPKQHKRYSFSRTAPGEEASNQSGKHGSSVSKESGENSKGSRAPHVSQSTGR
KRDERIQLQRKNTFAAPRNVKPLGWTVSK
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtttgagaaatcacccgtggggcaagacactggaatggacgagagcgatact
gttgaaaaccctaaaaccagtctgaaatccagcagcgattcagaagatgaatcagatcag
aaagagaagctcttaaccctagaatacgagctctccaccaatccttccaactacgatgcc
catgtccagtacataaatcttttgaggagaagtggtgaaatagagaagctgcgggaagca
agggaaaatatgaatacatcgtttccactgagtcctgaaatgtggatagaatgggctaag
gacgaagcttctcttttgaatgattccaatttcgagtcagtcgagaagctttaccagaga
ggcatctttgagtatctgtctatccccctttggtgtgagtacctaaattatgtgcaacga
catgataaaaaagtgtgtgattgttcagccgatgggatttcaaaggcaagaaatctgttt
gagcgagctgtcacagctgctgctctgcatgtttctcaaggctctctaatatgggatgca
tatacccaatttgagcaagctattttactaactattgaccaatccgacatccaggccaaa
gaaaaacaggtccagcgcataaggagtatattccatcggcacttgtctattccccatgct
aacttggagtctactcttctagcctacaaggcatgggaggtggagcaagggaattctctt
gatgctgaatccggcaatgtttttgggatttcttcccatgttgcttcggcttaccagaag
gcagaggagatgtacaatgcccgtgcacatcttgaagatcagattactaggcaggatgta
tccgagtctgaaagatttcaacattacatgagctacttagattttgaaaaatcctgtggt
gatccagcccgtgttcagattctgtatgaacgtggcataactgactttcctgtatcaagt
gatctctggcttcattatactcgctatcttgataaaaccttgaaggcaggaaatgttgtg
aaggatgtttattccagggatacaagaagctgtccttgggttggagaactttgggttcga
tatttgctgtgtttggagcgtggtcttgattctgagaaagagatatctgctgcatttgag
aagtccctcaaatgcacgttttcaacccttgagaagtaccttgatttgttcctcacccga
gtagatggcttgaggcgtagaatttcatcagatagtggagatgattcgttgaacctttca
attattagggaaacttttcagcaagcagcagattacttatcaccgcacatgaagaacact
gttggtttcttgcatttgcatgcttattgggctcgtttagagctgaaattgggaaatgat
ttaaatgcagctcgtggtgtttgggagagcttgcttaaaagctgtggttcaatattggaa
gcatggcagagttatatattaatggaaatcgagttagatcatataaatgaagccagggcc
atatataagagatgctacagtaaaagatttagtggaacaggttcagaggacatctgccat
tcttggttgcgctttgagagggaatttggaacactagaagaactcaaccatgctgagcaa
aaggttactcctcgtcttgaggagctgcagttgtttaggttacagcaggaatctaaatgt
ctcactggagcaacagatcaaagagagcagacccttaagaacaccgttcgtgagaagagg
aaatcaggttcaagtgcaatagatgatcactctccagcaaagcagcaaaaacatacttct
caaaataagaaattgcacaagagagagaacacacaagggctgaacttaactgaagtaaat
gatggggaagagaaaaaaggcaaggttgaggaacaagtaaatgagaagcagatgaaagac
actaatcctactaagcccaggatatatacggatcagtgtactgcatttgtatcaaatctg
agcattacggcaaaagatgaagatttacttcaattctttaatgatgttggtggggtgact
gcaattcgagttctgctcgataagttcactggaaaatcaaggggactggcatatgtggat
tttgaggatgatgaacaccttgctgcagctgtagcgaagaataagcaaatgttgcttgga
aagaagttgagtattgcacggtcaaatccaaagcaacacaagagatactctttttctcgt
actgcacccggtgaagaagctagcaatcaaagtggaaagcatgggagttccgtatctaaa
gaatctggtgaaaactcaaagggatctagagcaccgcatgtatcacaatccactggtcgt
aagcgtgatgagagaatccagctccagaggaagaacacatttgcagcgccaagaaatgtt
aaaccacttggatggactgtgtcgaaatga
DBGET
integrated database retrieval system
