Hibiscus syriacus (Rose-of-Sharon): 120117031
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Entry
120117031 CDS
T09559
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 8
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120117031
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsyr04040
]
120117031
Ion channels [BR:
hsyr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120117031
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
120117031
NCBI-ProteinID:
XP_038993304
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MFGGAYKSQLIGGQKEKFVRLDDLDSPISMASGTGGLKMCGLNVDGYKYREHGKKAASKK
SFNIGMMKGPGGLLTLSRNLKSEVTRVVFPEDLRVSDKMIFDPQDKSILLWNRFFVVSCI
LSVSIDPLFFYLPNFNGRAHCLGIDVRLGITTTTVRTIIDALYLIRMGLQFRTAYIAPSS
RVFGRGELVIDPAQIATRYLSRYFIVDFLSVLPLPQFVVWKYLHKTKGSEVWATKQALLI
IVFLQYIPRFLRFVPLTSELKKTAGTFADSAWVGAAYYLLWYMLASHIVGAVWYLLAIER
KDTCWRIACQESEKCSIDFLYCGNKHMHGFPEWRRVRNKELDSQCSLESNDAPFDYGIYT
RAITSEITSSTEFFPKFCFCLWWGLQNLSTLGQGLETSTYSGEILFSIAIAIFGLILMAL
LIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRALPEDLKERVRRYDQYKWMETRGVDEE
NLVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTENTYIVREGD
PVNEMLFVIRGRLESVTTDGGRSGFYNRGLLKEGDFCGEELLTWALDPKAASNLPLSTRT
VMALTEVEAFALVAEELKFVSSQFRRLHSRQVQHTFRFYSQQWQTWAACFIQTAWRKHVK
RKEVELRRKEEEDLDYIYDDQQALIDPTDSTAESHSLRATVFASRFAANLRGQKGRGSTS
SKSLLKVSKPKDPDFSDLDSDGFGGKIN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtggtgcttacaagtctcagcttattggaggtcagaaggagaaatttgttagg
ttggatgatttagactctccgatatcaatggcgtctggaacaggaggactgaagatgtgc
ggacttaatgtagatggctacaaatacagagagcatggaaagaaggcggcatcaaaaaaa
tcatttaatatagggatgatgaaaggaccaggagggttactaacactcagtcgcaacctc
aaatctgaggtcacgcgagttgtgttcccggaagatctccgagtgtcagataagatgata
tttgatccccaagataaatctattttgctatggaatagattctttgttgtgtcttgcatt
ctttcagtatctattgatccactgtttttctatcttcccaactttaatggtcgagcacat
tgccttggaattgatgtaagattgggaatcacaaccactaccgttcggacaattatcgat
gctctctacctcattcgtatgggtctgcagttccgtacagcatatattgcaccatcatca
agggtttttggacgaggtgaacttgtgatagatcctgcacagatagccacacgatattta
agtcgttatttcattgttgattttctttccgtgctccccctgccacagtttgtggtgtgg
aaatatcttcacaagacaaaaggttcggaggtatgggcgacgaaacaggcattgctaatc
attgtatttcttcagtatattcctaggtttcttcgctttgtaccattaacttcagaattg
aagaagacagccggtactttcgctgatagtgcttgggttggtgctgcatattatctgcta
tggtacatgcttgccagtcatatagttggtgcagtttggtacctgctggctatagagcgt
aaagatacatgctggcgaattgcttgtcaagaaagtgaaaagtgcagcatagatttcttg
tactgcggcaacaagcatatgcatggtttcccagaatggcgaagggtgagaaacaaagaa
cttgatagccaatgttctcttgaatctaatgatgcacctttcgattatgggatctacaca
cgagctataacatcagagattacttcatccaccgaatttttccctaaattttgtttctgt
ctctggtggggtttacagaatctaagtacacttggtcagggacttgaaaccagcacatat
tcaggagagattctcttttccatagcaatagctatctttgggcttatcctcatggcactt
ttgattggaaacatgcagacctaccttcagtctctcacagttcgtcttgaggaaatgagg
atcaaaaggcgtgactctgagcaatggatgcatcaccgtgcacttcccgaagatctcaag
gagagagttcggcgctatgaccaatacaaatggatggagactcgtggagttgacgaagaa
aacttagtccagagtttaccaaaagatctgaggagggacattaagcgacatctatgtttg
aatctggtccgaagggttcctctgtttgccaatatggatgagagattgcttgatgcaatc
tgtgagagactcaaaccaagtttatacacagaaaacacttacatagtccgtgaaggggat
ccagtaaacgagatgctttttgttatacgtggtcgcctcgaaagtgtgacgacagatggt
gggaggagcggtttttacaacagaggtttgctgaaagagggggacttttgcggtgaggag
ctcttgacttgggcgctggaccccaaagctgcttccaatttgccattatctactcgaaca
gtcatggctttaaccgaggtggaggcttttgctttggtagcggaagagctgaaattcgtt
tcgagtcagttcaggcgtctccatagtaggcaggttcagcacaccttccggttctactcg
cagcaatggcagacttgggctgcctgtttcatccaaaccgcatggcgcaagcatgtgaaa
aggaaagaagtggaacttagacgcaaggaagaggaggatctagactatatttatgatgat
cagcaagccttaattgatccaactgatagcactgcagaatcccacagccttcgtgcaact
gtatttgcatcacggtttgcagctaatcttcgcggccaaaagggtagaggctcgactagt
tcaaagagtttgctcaaggtttcaaagccaaaagatcctgatttctccgatcttgattct
gatgggttcggcggtaaaatcaattga
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