Hibiscus syriacus (Rose-of-Sharon): 120117245
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Entry
120117245 CDS
T09559
Name
(RefSeq) recQ-mediated genome instability protein 1-like
KO
K10990
RecQ-mediated genome instability protein 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120117245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120117245
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
120117245
FA (Fanconi anemia) pathway
120117245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
120117245
NCBI-ProteinID:
XP_038993464
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MARRRLRLHCSSDEEDAESQQQPQYEPPQGSSAVRNQPVTVSPPDPNPAEPLAISDDDFV
DAGESLTPSPVEETSAPLTSVESYGSPIADFLLGMGLKLRREWLDSCVQGLESSVPRFLN
LDISEKAKLCFQQFLLSDMNYSGGGILPENVDSMRLVDLKGPFVLQVDEIVNISCPLKGR
YQDTPGLKRCLKLSITDGVQRVFGMEYRPIKDLQVLTPAGLKVVICNVHIRRGLLMLVPE
SLEILGGVVEDLEAARQRLVAEVNKPPRGKRTKTGLILPLATRATLAALPLNGVNSVEPT
NTLISQNLAPFWTDERGATLVSSSTVTERTVEDPTARTGGANAAPNSSSDVALDVERMHI
DSVSNSRENAMSNSNLNTAPDNEHIHVVEHPLILLGDREVPFTYLASLSAKWAAIKDKAT
YVQGKIKCFLTGVKGFQYKQRTIYELLCYVDDGSLISEILIDHNVVQKGIGRSPQEVTAA
LSSSDKQIVSGMKETMRQFQAFLAHFEGLMLVEINRTTPLPIAKEMTQGCPASDARLLLR
RLTPSSCRTPEHRPSDPIEISH
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccagaagacgcctaaggctgcactgctcatccgacgaagaagatgcagaaagccaa
caacaaccccaatacgaacctccacaaggaagctccgccgtccgtaaccaacccgtgaca
gtatctcctcctgaccctaaccccgccgagccactcgcgatctccgacgacgatttcgtc
gatgccggtgaaagcttgactccttctccggtggaggaaacgtctgcaccgcttacatca
gtggagagctatggctctccgattgctgactttcttttagggatgggactcaaattgagg
agagagtggctggattcctgcgttcaaggattagagagctcggtccctaggtttttgaat
ctcgatatttctgaaaaggcgaagctttgctttcaacaattcttgctttctgatatgaat
tactccggcggcggtattcttcctgaaaatgttgattctatgcgtcttgttgatctcaaa
ggaccctttgttttgcaggttgatgagatagtaaatatcagttgtccgctcaagggaagg
tatcaggatacacctggactcaagaggtgccttaaattatccattacagatggtgttcaa
cgcgtgttcggcatggaatacaggcctatcaaagatcttcaagttttgactcctgctgga
ttgaaggtagttatctgtaatgtgcatatacgacgtgggcttcttatgctggttcctgaa
agtttagaaattctagggggagtggttgaggacctagaagctgcacgacagcgccttgtt
gctgaagtaaacaagccacctaggggtaaaagaacaaagacaggactgattcttccttta
gcaactagagcaactcttgctgcattgccactgaatggtgttaattctgttgagccaact
aacactttaatatctcaaaacttggctcctttttggacagatgaaagaggtgctactttg
gtttcatctagcactgttactgaaagaactgtagaggatcccactgctcgtacgggtggg
gcgaatgctgcgcctaattcatcatcggatgttgctttggatgttgagaggatgcatatt
gatagtgtttccaatagcagggaaaatgctatgtcaaattcaaacttgaataccgcacca
gataacgagcacatccatgtggttgaacatcctctcatactgttgggagaccgagaagtc
ccctttacctacttagctagtttgtcagccaagtgggctgctattaaagataaagctacg
tatgtacagggaaaaattaagtgcttcttgactggtgtcaagggattccagtataagcaa
aggacaatttacgagcttctatgttatgttgacgatggtagcctcatctccgagatcctc
attgatcacaatgttgtgcagaaaggaataggccgttctccgcaagaggtcactgcagct
ctttcttcttcagacaaacaaatagttagtggtatgaaggagactatgaggcagtttcag
gcatttttagcacattttgagggtttgatgctcgtagagataaacagaacaactcctctc
ccaattgccaaggagatgacccagggctgtcctgcatctgatgcaagattgcttcttaga
agattgacgccttcttcgtgccgaactccggagcaccggccgtcggatcccatcgagata
tcccattaa
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