Hibiscus syriacus (Rose-of-Sharon): 120117257
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Entry
120117257 CDS
T09559
Name
(RefSeq) chaperone protein ClpD, chloroplastic-like
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_16
AAA_22
Sigma54_activat
nSTAND3
IstB_IS21
NBD_SMAX1
NACHT
Zeta_toxin
AAA_28
ARM_KDM8_N
Motif
Other DBs
NCBI-GeneID:
120117257
NCBI-ProteinID:
XP_038993483
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MEVLCCSSSSPLAIHFHSRGVFSHSPSSPRFPFRFHRNSNGNSISSSSSSCFGLSISRYN
NFFHVKHSHSRKRRKPIQISAVFERFTERAIKAVILSQREAKSLGKDMVFTQHLLLGLIG
EDRDPNGFLGSGLRIDNAREVVRSIWQGNNHDSGDDSGDKQQGPIVSSTDVPFSISTKRV
FEAAVEYSRTMGYNFIAPEHIAIGLFTVDDGSATRVLKRLGANINHLAASAVTRLQGELI
KDGREPSLSSKKMSEKSLSSNPGALRSPDKLKGKSALAQFCVDLTARASEGFIDPVIGRE
NEVQRIIQILCRRTKNNPILLGESGVGKTAIAEGLAISIAQAEIPAFLLNKKIMSLDIGL
LMAGAKERGELEARVTALISETRKSGNIILFIDEVHTLIGSGTVGRGNKGSGLDIANLLK
PALGRGELQCIASTTMGEYRTQFEKDKALARRFQPVWINEPSQEDAVEILLGLREKYESH
HHCRYTLEALNAAVYLSARYISDRYLPDKAIDLIDEAGSRARIEAFRRKREQETDILSKT
PDDYWEEIRAVQAMHDVVMASRLKIDAGVSDADDSSELLVESSLPSTSENDEPIMVGPED
IATVASVWSGIPVKQITADERMLLVGLDEMLKKRVIGQDEAVAAISRAVKRSRVGLKDPD
RPIAAMIFCGPTGVGKTELTKALAACYFGSEDAMLRLDMSEYMERHTVSKLIGSPPGYVG
YEEGGMLTEAIRRRPFTLLLLDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALVV
MTSNVGSSAIAKGRSGSIGFILENNEATSYAGMKALVMEELKAYFRPELLNRIDEVVVFR
SLRKAQMLEIVNLMLQEVNARLMSLGIGLEVSESIKDLICQQGYDQTYGARPLRRAVTLI
VEDPLSEALLAGDYRPGETVVIDLDASGNPIVTSRSDRDISLSDTASMF
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggaggttctttgttgttcttcttcttctcctctagcgattcatttccattcacgtggc
gtattttcccattctccatcatccccacgtttcccttttcgttttcatcgaaattctaat
ggcaattcgatttcttcttcaagttcttcttgttttggcctctcaatctctcgttacaat
aactttttccatgtcaaacattcccattctcgtaaaaggagaaaacccattcagatttct
gctgttttcgagcgtttcacagagcgagcgatcaaagccgtgatcctttcccagagggaa
gccaaatctcttggcaaagacatggtttttacccagcatcttttgctgggtttgattggc
gaggatcgtgaccccaatggtttcttggggtctggcttgagaatcgataatgctcgtgag
gttgttcgtagtatttggcaaggtaataaccatgattcaggtgatgattcgggtgataaa
caacaagggcctatagtttcttctacggatgtgccgttctcgatcagcacaaaacgggtt
tttgaggctgctgtggagtattcgaggactatgggttacaatttcatcgcacccgagcat
attgctattggtttgttcaccgttgatgatggaagtgctactcgggtccttaagagattg
ggagcaaatataaatcacttggcagcctcagcggtcaccagactgcaaggggagcttata
aaagatggtagggaaccttcattgtcatcaaaaaagatgagtgaaaaatctctttccagt
aatcctggtgctttgaggtcccctgacaagctaaaagggaaaagtgctttggctcaattc
tgcgtggatcttacagctcgtgcaagtgagggattcattgatcctgttattggcagagag
aatgaagttcaaagaattattcagatactttgccgtcgcaccaagaataacccgattctt
cttggtgaaagtggggttggtaaaacagccattgccgaaggacttgcgattagcattgca
caggcagaaatcccagcatttctcttgaataaaaaaataatgtcattggacataggactg
ctcatggcaggcgcaaaggagaggggagaattggaggcacgtgttactgctctgattagt
gagacaagaaaatcaggtaatattattctttttatcgatgaagtccacacacttattgga
tctggtacggtcggccgaggaaacaagggatctggtcttgacatcgcaaatctactgaag
cctgcacttggtaggggtgaattacagtgtatcgcatcaacgactatgggggaatatagg
acccaatttgaaaaggataaagcattagctcgaaggtttcaaccagtatggatcaatgag
ccaagtcaggaagatgcagttgagatactgcttggtctgcgtgaaaagtacgagtctcat
caccactgcagatacactctggaagcactaaatgctgctgtatacctatcagcaagatac
atttctgataggtatcttccggataaagcgattgacctgattgatgaggccggaagtcga
gctcgtattgaggcatttaggaggaaaagagagcaagaaactgacattctctcaaagaca
cctgatgattattgggaagaaatcagagccgttcaggcaatgcatgacgtggtcatggcc
agtaggttgaaaattgatgctggtgtttcggatgcggatgattccagtgaactcctcgta
gaatcctctttgccttctacatcagagaatgatgaacctataatggtgggacctgaagat
attgcaacagttgcttcagtttggtcagggataccagtgaagcagatcactgcagatgaa
aggatgcttctagttggccttgatgagatgcttaagaaaagggttattggtcaggatgag
gccgtcgctgccatttctcgagctgttaagagatctcgtgttggcctaaaggatccagat
aggccaattgctgcaatgatcttttgtggtccaaccggggtaggcaaaactgaattaaca
aaagctttagcagcatgctattttgggtcggaggatgctatgcttagattggacatgagt
gaatacatggagcgacatacagtgagtaaattaataggatcgccaccaggatatgtcggc
tatgaagagggaggtatgcttacggaagctattagaagacgacccttcacgctgttattg
cttgatgaaatagagaaagctcatcctgatatattcaacatccttctccaactgtttgaa
gatggtcacctcacagattcacagggtcgaagagtttctttcaagaatgcattggtggtg
atgacttcaaatgtgggttcttctgcgatcgcaaagggtaggagtggctccattggtttc
atacttgagaacaatgaagcaacttcgtatgctggaatgaaggctctagtaatggaagaa
ctgaaggcatatttccgtcctgagttactcaacaggattgatgaagtagttgtctttcgg
tctctccggaaagctcagatgcttgagattgtaaacctgatgctgcaagaggttaatgct
agacttatgtctctgggaattggtttggaggtgtctgaatcaatcaaagacctcatttgt
caacaaggctatgaccagacatatggtgcgcggcccctcaggagggcggttaccttgata
gttgaagaccccctgagtgaagccctcctggccggagattacaggcccggagaaacggtt
gttatcgatctggatgcttcaggaaaccccattgttacaagccgatcagaccgggacatc
agcttgtctgatacagcatccatgttctag
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