KEGG   Hibiscus syriacus (Rose-of-Sharon): 120117488
Entry
120117488         CDS       T09559                                 
Name
(RefSeq) splicing factor 3B subunit 6-like protein
  KO
K12833  pre-mRNA branch site protein p14
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120117488
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsyr03041]
    120117488
Spliceosome [BR:hsyr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120117488
 Complex B
    120117488
 Complex C
   U2 SnRNP specific factors
    120117488
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_MUD2_C RRM_10 RRM_7 DUF8400
Other DBs
NCBI-GeneID: 120117488
NCBI-ProteinID: XP_038993690
LinkDB
Position
Unknown
AA seq 124 aa
MASISLRKANTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTSKETRGTA
FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEEEITKMQEKYGVS
TKDK
NT seq 375 nt   +upstreamnt  +downstreamnt
atggcatcaatcagtctacgcaaggccaacactcggctgccgcctgaagtcaaccgggtg
ctctacgttcggaacctgccattcaacatatcgagcgaggagatgtacgatatcttcggc
aaatacggagccatccgccagatacgcatcgggaccagcaaagaaacgcgcggaaccgca
ttcgttgtatacgaggacatatacgatgccaaaacggccgtggatcatctctcgggtttc
aacgtcgccaataggtatttgatcgtgttgtattatcagcaggccaagatgagcaagaag
ttcgatcagaagaagaaggaagaggaaatcactaagatgcaagagaaatacggcgtttct
actaaagataagtga

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