Hibiscus syriacus (Rose-of-Sharon): 120118134
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Entry
120118134 CDS
T09559
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120118134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120118134
03110 Chaperones and folding catalysts [BR:
hsyr03110
]
120118134
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120118134
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsyr04147
]
120118134
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120118134
Messenger RNA biogenesis [BR:
hsyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120118134
Chaperones and folding catalysts [BR:
hsyr03110
]
Heat shock proteins
HSP60 / Chaperonin
120118134
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120118134
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120118134
Exosomal proteins of other body fluids (saliva and urine)
120118134
Exosomal proteins of breast cancer cells
120118134
Exosomal proteins of colorectal cancer cells
120118134
Exosomal proteins of bladder cancer cells
120118134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120118134
NCBI-ProteinID:
XP_038994190
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MACSPSPLPGISFTNPTLSKSRRSSSSHYSTLKKPRAMAKEIYFNRDGSATKKLQAGVDK
VAELIGLTLGPKGRNVVLQNKYGPPKIVNDGETVLKQIELEDPLENVGVKLVRQAGAKTN
DLAGDGCTTSIILAHGLITEGVKVVSAGLNPVQIARGIEKTANALVSELKMMSREVEDHE
LAHVAAVSAGNDYAVGKMISDALQLVGRKGVVKIEKGKCTETSLEMVEGMQFDRGYLSPY
FVTDRENMIIEFHNCKLLLVDKKITNPKEMFKILDSAVKEKYPIVIVAEEIEKEALAPVI
RNKLKGVLKAAAIKAPAFGERKSHCLDDIAILTGGTVVRDDMGLTLDSVGKEVLGTATKV
VITKDSTYIVSDGSTREAVRKRVSQIQNLVENTEENFQKEILNERIARLSGGIAILQVGA
QTQVELKDKQLRMEDALNATKAAIEEGVVVGGGCILLRLSEKVDGIKNLLDNQEQKIGAE
IFKRALSYPAKLIAKNAGVNGSVVVEKVLSNDDTRYGYNAARNSYEDLMEAGIMDPTKVV
RCCLEHAASVAKVFLTSDAVVVDIVDNKDIKFTPTPTRKQMQSLTNSILPKRLRRPSFSI
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcatgttcaccatctccacttcctgggatatctttcactaacccaacattgtccaaa
tccagaaggtcatcttcttcacattattccaccttgaaaaagcccagagccatggccaaa
gaaatttacttcaaccgtgatggctctgccactaagaagcttcaggctggtgtggataaa
gtggcagaactgattgggcttacattaggtccaaaggggagaaatgttgtgcttcagaac
aagtatggaccccccaagattgttaatgatggagaaactgttctcaaacagattgagctg
gaggatccattggagaatgttggggttaaattagtgaggcaagctggtgcaaaaacaaat
gaccttgctggtgatggttgcactacctctataattcttgctcatggtttaattacagaa
ggtgtgaaggtagtttcagctggattgaatccggttcaaattgctcgcgggatcgagaag
accgcgaacgcccttgtttctgaactcaaaatgatgtccagagaggttgaggatcatgaa
cttgcacatgttgctgctgttagtgccggaaacgattacgcggtaggaaagatgatctcg
gatgctcttcaactagttggaaggaagggtgtagtcaaaatcgaaaaaggaaaatgtact
gaaaccagtctagagatggtggaaggaatgcagttcgatcgagggtatttgtctccctac
ttcgtcaccgatcgagaaaatatgatcatcgagttccacaattgcaagttactattggtt
gacaagaaaatcacaaatccaaaggagatgttcaaaatattggacagtgctgttaaagag
aagtacccgatcgtgatcgttgccgaggagatcgagaaggaagctcttgctccagtgatt
aggaacaaactcaagggtgtgctgaaggcagctgctattaaggccccggccttcggtgag
cgcaagagccactgcttggacgatatcgctatcttgaccggaggcacggtggtcagagat
gatatgggtttaactcttgatagtgtggggaaagaggttctaggtacagcgacaaaggtc
gtgattactaaggattctacctacatagttagcgatggtagcacacgagaagcagttcgg
aaaagagtttctcagatacaaaatctggttgagaacacagaggagaattttcaaaaggag
atactcaatgaaagaattgccagattatcaggaggaattgcaattcttcaggttggagca
caaacacaagttgaattgaaggacaaacaacttcgaatggaagatgctttaaatgcaacc
aaggcagcaatcgaggaaggtgtcgtagtcggaggtggttgtatcctcttgcggctctct
gaaaaggtggacggcataaaaaacctgttagataatcaagagcaaaagattggagctgag
atattcaagagagcattaagctatccggcgaaactaattgccaaaaatgctggtgttaac
gggagtgttgttgtagagaaggtcttatcgaatgatgatacccgatacgggtacaatgcc
gcaagaaactcttacgaggatttgatggaagctggaataatggatcctacaaaggtagtt
cgatgttgtctggagcatgcagcatcggttgccaaggtttttctaacatctgatgctgtt
gtagtagacatagtagacaataaggatatcaagttcacacccacaccgacgagaaagcaa
atgcaaagcttgactaactcgatcttgcctaaacgattacgacggccctcattcagcata
tga
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