KEGG   Hibiscus syriacus (Rose-of-Sharon): 120118404
Entry
120118404         CDS       T09559                                 
Name
(RefSeq) protein RAE1-like isoform X1
  KO
K14298  mRNA export factor
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120118404
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120118404
   03036 Chromosome and associated proteins [BR:hsyr03036]
    120118404
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120118404
Chromosome and associated proteins [BR:hsyr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    120118404
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd WD40_Gbeta ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML EIF3I Beta-prop_NOL10_N Beta-prop_TEP1_C Beta-prop_ACSF4 PAC11 Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_WDR41 PQQ_2
Other DBs
NCBI-GeneID: 120118404
NCBI-ProteinID: XP_038994371
LinkDB
Position
Unknown
AA seq 337 aa
MSTFGAAAANHNPNKSFEVAQPPSDSVSSLSFSPKANFLIATSWDNQVRCWEISRNGTAV
GSTPKASITHDHPVLCSTWKDDGTTVFCGGCDKQVKMWPLLSGGQPMTAAMHDAPIKEVA
WIPEMNLLATGSLDKTLKYWDTRQSNPVHTQQLPDRCYALTVKYPLMVVGTADRNLIVFN
LQNPQNEFKRVTSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDGQQSKNFTFKCHR
DGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCGTFNNDGS
IYAYSVCYDWSKGAENHNPSTAKTYIFLHLPQVHKNK
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgtctactttcggtgccgccgccgccaatcataaccctaacaaatcattcgaggttgcg
caaccgcccagtgattctgtttcaagccttagttttagtcccaaagccaatttcttgatt
gctacttcatgggataatcaggtgagatgttgggaaatatcccggaatggtacagctgtt
ggtagtactccaaaggcatcaattactcatgatcacccggttttgtgctcaacttggaag
gatgatggtacaacggtcttttgtggaggctgtgacaagcaggtcaagatgtggccttta
ttatctggtggtcaaccaatgacagctgccatgcatgatgcccctattaaagaggttgct
tggataccagagatgaacctcttagctaccggtagcttggacaagacattaaaatactgg
gatacaaggcagtcaaacccagtacatacccaacaacttcctgatcgatgctatgcactc
acggtgaaatatccattgatggttgttggcactgcagatagaaatctaattgtctttaac
ttgcagaatcctcagaatgaattcaagagagtcacctcacccctcaagtatcagacaaga
tgtgttgctgccttccctgaccagcaaggatttttggttggttcaatcgagggaagggtc
ggtgtacaccaccttgatgatggccaacagagtaaaaactttacatttaaatgccacagg
gatggcagtgagatatattctgttaattcgttaaacttccatcctgtacatcacactttt
gccactgcaggttctgatggtgctttcaatttctgggacaaggatagtaaacagagacta
aaggcaatgtcaaggtgcagtcaacctataccatgcggtactttcaacaatgatggatca
atatatgcatattcggtttgctatgactggagtaagggtgctgaaaatcacaacccatcg
acagccaaaacctacattttccttcacttgccacaggtacataaaaacaaataa

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