Hibiscus syriacus (Rose-of-Sharon): 120118478
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Entry
120118478 CDS
T09559
Name
(RefSeq) autophagy-related protein 18c-like isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120118478
Membrane trafficking [BR:
hsyr04131
]
Autophagy
Other autophagy associated proteins
Others
120118478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_IFT140_2nd
BCAS3_WD40
WDR55
Beta-prop_EML
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
120118478
NCBI-ProteinID:
XP_038994440
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MTSTTLSTSPPLFARTSGEPTQPHIPDDPSSFMQSQDAPDIDQIELLSVSWNQDYGCFAA
GTSQGFRIYNCQPFKETFRRDLKTGGFKIVEMLFRCNILALVGGDPNSQYPPNKVIIWDD
HQSRCIGEFAFRSEVRGVKLRRDRIVVILEHKIYVYSFMDLKLLHQIETLANPRGLCCLS
HHSNTSVLACPGLHRGQVRIGHFGLNRMKLINAHDSHIACLTLTFDGLLLVTASTKGTLI
RIFNTMEGTRLQEVRRGVDRADIYSLALSPNAQWLAVSSDKGTVHIFHLRVRVFGEDSSS
LQYSVQGPALFHQNSSTSLDALITPSTGANPGSSLSFMRGVLPKYFSSEWSFARFHLTED
THQFIAAFGSQNSVIIVGTNGSFYRCSFDPANGGELLQQEYVKFLETDSRHA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaaccacactgtccacctctccaccactctttgctaggacatccggagaacct
actcaacctcacattcccgatgatccgtcatcctttatgcagtcccaggatgcccctgat
attgaccaaatagagttactctctgtgtcctggaaccaggattatggctgctttgctgct
ggcacatcccaaggtttccgtatttataattgtcaaccctttaaggaaaccttcagacgt
gatctcaaaactgggggtttcaaaattgttgaaatgctcttccgctgcaacattttggca
cttgtcggtggggaccccaattcccagtaccctccaaacaaagttataatctgggacgat
catcaaagtcgctgcattggtgaatttgcatttaggtctgaggttcgaggtgtcaaatta
aggcgtgatcgcattgttgtgattctggagcacaagatatatgtctacagttttatggat
ctcaagcttcttcatcaaatcgagactttggccaatcctaggggcctctgttgcctttct
catcattctaatacatctgtattggcttgtcctggtcttcatcgaggacaagttagaatc
ggacactttggcctcaataggatgaaactaattaatgctcatgattctcatattgcttgc
ttgaccttgacatttgatggtctacttcttgtaactgctagtaccaagggcaccttgata
agaatattcaacacaatggaaggaactcgcttacaagaggtacgaagaggagttgacaga
gcagatatctatagccttgccctctcaccaaatgcccaatggttggctgtgtcgagtgat
aagggaactgttcatatatttcaccttcgagttagagtttttggggaggattcatcttct
ctacaatattctgtccaaggtccagcattatttcatcagaattcttcgacatcacttgat
gctcttatcactccaagcactggtgccaatcctggttcatcattgtcttttatgagaggg
gttttaccgaaatattttagctcagaatggtcatttgctcggtttcacttaactgaagat
acccaccaattcattgcagcgtttggatctcaaaacagtgttattattgttggcacgaat
gggagtttctacaggtgcagttttgatcccgctaatggtggagagctgttgcagcaggaa
tatgtaaagtttttggaaactgatagccggcatgcctag
DBGET
integrated database retrieval system
