Hibiscus syriacus (Rose-of-Sharon): 120118928
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Entry
120118928 CDS
T09559
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120118928
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsyr01009
]
120118928
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120118928
Protein phosphatases and associated proteins [BR:
hsyr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120118928
Spliceosome [BR:
hsyr03041
]
Common components
Common spliceosomal components
SR proteins
120118928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
CoV_nucleocap
NMT_C
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120118928
NCBI-ProteinID:
XP_038994767
LinkDB
All DBs
Position
Unknown
AA seq
221 aa
AA seq
DB search
MADSPRKRNSHSPSPWREQSRSRSRPRSRSRSRSRSWSRPRHRSRSRSPGRSRSRGRAET
GNPGNTLYVTGLSQRVTEKDVEEHFSKEGKVASCFLVVEPRTRISRGFAFITMDSVEDAD
RCIKYLNQSVLEGRYVTVERSRRKRPRTPTPGHYLGLKNTRDYGGRGDRGRYRGSHDDYA
YRRSPRHSPYRGRDYSPRYSPRGGRSRRDRSYSPPYSRGSR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctcctcgtaaaaggaattctcattctccctctccatggagagaacagtca
aggtccagatctagacctaggtctaggtctaggtcaagatcccgctcctggtcgaggccg
aggcataggtctcgatcacgtagtcccggcaggtcaagaagtcgtggcagggctgaaact
ggaaatcctggcaacacgctttatgtgactggtctatctcaaagggtcacagagaaggac
gttgaagagcacttctccaaggaggggaaggtggcatcatgttttctggtcgttgaacct
cgcacacgcatatctcgtggctttgcttttattaccatggacagtgttgaagatgccgac
cgctgcatcaagtatctcaaccaatcagttttagaaggtcgatacgtaactgtggagagg
tcacgtaggaaacggccaaggactccaacaccggggcattatcttggactgaaaaatacc
agagactatggtggtcggggtgaccgtggcaggtatcgtggtagtcatgacgactatgcg
tatcgtcgatctccaaggcactcaccatatcgaggtcgtgattattctccaagatattcc
cctcgtggcggaagatcaagaagggaccgctcgtattctccaccttactctcgtggttct
aggtga
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