Hibiscus syriacus (Rose-of-Sharon): 120119329
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Entry
120119329 CDS
T09559
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120119329
03041 Spliceosome [BR:
hsyr03041
]
120119329
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120119329
Spliceosome [BR:
hsyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120119329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120119329
NCBI-ProteinID:
XP_038995077
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MQHQRMKQQQQALMQQALLQQQSLYHPGILAPPQIEPIPSGNLPPGFDPSTCRSVYVGNI
HTQVTEPLLQEVFASTGPVEGCKLVRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI
KVNWAYASGQREDTSGHFNIFVGDLSPEVTDAMLFACFSVYPSCSDARVMWDQKTGRSRG
FGFVSFRNQQEAQSAINDSSGKWLGSRQIRCNWATKGATSSDDKQSSDAKSVVELTNGSS
EDGKETTNTEAPENNPQYTTVYVGNLASEVTQLELHCHFHALGAGVIEEVRVQRDKGFGF
VRYSTHAEAALAIRMGNTQSFLFGKQIKCSWGSKPTPPGTSSNPLPPPAAPLPGLSAIDL
LAYERQLAMNKMGIHALMHPQGQHPLKPGAMGVGAAGGSQAIYDGGFQNVAAAQQLMYYQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccagaggatgaagcaacagcaacaagccttgatgcaacaagctcttcttcaa
caacagtctctctaccatcctggcatattagctcctccacagatagagccaattccaagt
ggaaatctgcctcctggttttgatccaagtacttgccgcagtgtgtatgtgggaaacata
catacacaggttactgaaccactacttcaagaggtttttgcaagtactggtcctgttgaa
ggttgcaagcttgtccgaaaggacaagtcatcatatggattcgtccactacttcgatcgt
agatcagctgctcttgctatattgtctctgaatggaaggcacttgtttggacagcctatc
aaggtcaattgggcatatgctagtggtcagagagaagatacatcaggtcactttaacatt
tttgttggggatctcagtcccgaagttactgatgcaatgctgtttgcctgcttttctgtc
tatcccagttgttcggatgcaagggttatgtgggatcagaaaactggacgttcaagagga
tttgggttcgtgtcattccgcaaccagcaggaagcacaaagtgcaattaatgactcaagt
ggaaagtggcttggcagtaggcagatccgttgtaactgggcaacaaagggtgctaccagc
agtgatgacaagcagagctctgatgccaaaagtgtggtggaactaaccaatggctcatct
gaggatggtaaagagacaacaaatactgaggctcctgagaataatcctcaatatactact
gtttacgtgggcaatcttgcttctgaggtcacccaactcgaactccattgtcacttccat
gctctcggtgctggggtgattgaggaggttcgggttcagcgcgataaaggctttggcttt
gtgagatacagtactcatgctgaggcagctttggctattcggatggggaacactcagtca
ttcctatttggcaagcaaataaagtgctcttggggcagcaagcctacaccaccagggaca
agctcgaatccacttcccccacccgcagcacccttgcccggcctttcagccattgacctt
ttagcttatgagcggcaacttgccatgaacaaaatgggtattcatgctctaatgcatcct
caggggcagcatcccctcaagccgggagcaatgggagtgggtgccgctggaggaagccag
gctatatacgatggtggattccagaacgttgctgccgcccagcaactaatgtactatcag
tga
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