KEGG   Hibiscus syriacus (Rose-of-Sharon): 120119401
Entry
120119401         CDS       T09559                                 
Name
(RefSeq) cullin-4-like
  KO
K10609  cullin 4
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03420  Nucleotide excision repair
hsyr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120119401
  09124 Replication and repair
   03420 Nucleotide excision repair
    120119401
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsyr04121]
    120119401
   03400 DNA repair and recombination proteins [BR:hsyr03400]
    120119401
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hsyr04147]
    120119401
Ubiquitin system [BR:hsyr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     120119401
DNA repair and recombination proteins [BR:hsyr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      120119401
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      120119401
Exosome [BR:hsyr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120119401
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 120119401
NCBI-ProteinID: XP_038995140
LinkDB
Position
Unknown
AA seq 816 aa
MSLPPTKRFFSNATSSSSSSSSSHHFQPPLKKAKSQAVACSLDPNKNGLHHHRNSQDDNI
VAFDPSSMPLDDDSKPDDACKPAAANLSRKKATPPQPAKKLVIKLVKAKPTLPTNFEEET
WAKLKSAITAIFFKQPDSCDLEKLYQAVNDLCLYKMGGSLYRRIEKECEEHISAALRSLV
GQSPDLVFLSLVEKCGQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRRHLS
LAPEVEHKTVTGLLRMIEGERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECTSEFY
AAEGMKYMQQSDVPDYLKHVEMRLHEEHERCLLYLDALTRKPLIATAEKQLLERHIPAIL
DKGFVTLMDGRRIEDLQRMYSLFSRVNALESLRQALSSYVRRTGQGIVMDEEKDKDMVSS
LLEFKASLDSIWEDSFSKNEAFSNTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGI
SEEELEGTLDKALVLFRFIQGKDVFGAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECG
SQFTNKLEGMFKDIELSKEINESFKQSSQARSKLPSGIEMSVHVLTTGYWPTYPPMDVRL
PHELNVYQDIFKDFYLSKYSGRRLMWQNSLGHCVLKADFPKGKKELSVSLFQTVVLMLFN
DALKLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKFPKGKDVEDDDSFVFNEGFTAP
LYRLKVNAIQMKETVEEHTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQL
KFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgtctctcccccccaccaaacgctttttttccaacgccacttcttcttcttcttcttct
tcctcatcacatcatttccagcctccacttaagaaagccaagtcccaagccgttgcttgc
tctctcgaccctaacaaaaacggcctccatcaccaccgtaacagccaagacgataacatc
gtggctttcgacccttcatctatgcccctcgacgatgattccaagcctgacgatgcttgt
aagcccgccgccgctaatttgtctcgcaaaaaggctaccccgcctcaacctgccaaaaag
cttgtcatcaaactcgttaaagcaaaacctacattgcctacgaattttgaggaggagaca
tgggcaaagctgaagtccgccattactgctatattttttaaacaaccagattcttgtgac
ttggagaagctttaccaggctgtcaatgatctttgcctgtacaagatgggaggaagcctt
taccgaaggattgaaaaagagtgtgaagaacatatatcagcagcactaagatctttggtt
gggcaaagcccagatctggttttcttatcacttgttgagaaatgtgggcaagatctttgt
gatcaaatgttaatgattcgtggtatagccttgtatctagacagaacatatgttaaacaa
accccaaatgtacgttcattgtgggacatgggcttgcagctcttccgtagacatctttct
ttggctcctgaagtcgagcacaaaactgtcactggtcttttgagaatgattgagggtgag
aggttaggtgaagcagtggataggacgctccttaatcatcttttgaagatgtttactgct
ttaggtatttactctgaaagctttgaaaagccattcctggagtgcacttctgagttttat
gcagctgaaggaatgaaatacatgcagcaatctgatgttccggattatctgaaacatgta
gagatgaggttacatgaagaacatgaaaggtgcttactctacctggatgctcttacaaga
aagccacttatagcaacagcagaaaagcaactgcttgaacgtcatatacctgctattctt
gataagggctttgtgacactgatggatggacgtcgtattgaggaccttcagagaatgtac
tcactgttttcaagggtcaatgctcttgaatcactcaggcaggctttaagttcatatgtt
aggagaactggacaaggcattgtcatggatgaagagaaagacaaggacatggtgtcttcc
ttgttagaattcaaagcttcacttgattcaatatgggaagacagcttttccaagaatgag
gcgtttagcaacaccatcaaagattcttttgagcatctaattaacctacgtcagaaccga
cccgctgagctgattgcaaagtttctggatgaaaagcttcgtgctggtaataagggtatt
tctgaagaggaattagagggaacacttgataaagctttggttttattcaggttcatccag
ggaaaggatgtctttggagcattctataagaaggatcttgcaaaaaggctgcttctagga
aagagtgcttctatagatgctgagaaatctatgatttctaagcttaagactgaatgtggc
agccaatttacaaacaaacttgaaggaatgttcaaggatattgaattatcaaaggagata
aatgaatcattcaagcagtcatcccaggccaggtcaaagcttccatcaggaattgagatg
agcgtccatgtcttaacaactgggtactggccaacgtacccacccatggatgttaggctt
ccacatgaactgaatgtctatcaggatatctttaaggacttctacttgagtaagtacagt
gggaggcgcttaatgtggcaaaattcattaggtcattgtgtgttgaaagctgattttccc
aaagggaaaaaggagctgtcagtttccttattccagaccgtagttctgatgttgttcaac
gatgccctaaagcttagctttcaagacattaaggattccactggcattgaggacaaagaa
ttgaggaggaccttgcagtcccttgcatgcgggaaagttagagtcctacaaaagtttccg
aaggggaaggatgtggaagatgatgattcattcgttttcaatgaaggatttactgctccg
ctctatcgtctaaaggtaaatgcaatccagatgaaagagacagtggaggagcacactagc
actaccgagagagtatttcaagaccgtcaatatcaggttgatgctgccattgttcggata
atgaagacgaggaaagtgttgagccacactcttttgataactgaactcttccaacagctt
aagttccccataaaaccagctgatttgaagaaaaggattgaatctctgattgaccgggag
tacctggagcgggacaagaacaacccacaaatatacaattacttggcatag

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