Hibiscus syriacus (Rose-of-Sharon): 120119451
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Entry
120119451 CDS
T09559
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120119451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120119451
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
120119451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
WHD_SOWAH
zf-C3HC4_3
Zn_Ribbon_1
DUF1258
Motif
Other DBs
NCBI-GeneID:
120119451
NCBI-ProteinID:
XP_038995195
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MSFDLMLKPTCSGCGSSQDLYGSNCKHMTLCVSCGKTMAENQGKCSECGAIITRLIREYN
VRASPSTDKTYFIGRFMTGLPNFSKKKNGENKWSMQKDGLQGRQVTDAMREKYKNKPWLL
EDETGQAQYQGQRECSQSATYYLLTMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRRKTADGYERWMMKAANNGAAAFGEVEKVDEKESTAGGGKGRKKSTAEEEEGHVSDRG
EEDEEEEAARKNRLGLNKKSGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVG
NDPEERDLAPEVPAPPEIKEDEDEQDEDEEGGGLSKSGKELQKLLGKASGLDESDADDDD
DDDDDDDVEDDMNFNPVLALKQKDAPKEEPADNSPMKPAPSASAKGTAAASKSSKGKRKP
NGGDTKASNGTPVKKVKSEPDSKASVKEENTTASKGSVHSKGTSSSAKAGSTSAASGSSS
SKAGSASAAGHVTEEEIRAVLLQKAPVTTSDLVAKFRARLKTPEDKKVFADILRRISKIQ
KTNGPNNYVVLREK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatctgatgctgaagcccacatgcagcggctgcggatcgtcccaagattta
tacggaagcaattgcaagcacatgaccctctgcgtctcttgtggcaaaaccatggccgag
aaccagggcaaatgctccgaatgtggcgccattataacccgcttgattcgagaatacaat
gttagagcaagtcctagcaccgacaagacttactttattggtaggtttatgactgggttg
cccaatttttcaaagaagaaaaatggagagaataaatggtctatgcaaaaagatggatta
caaggacgccaagttactgatgctatgcgggagaaatataagaacaaaccttggttattg
gaggatgaaacaggtcaggctcagtatcaaggtcagcgcgaatgttcacagtctgcaact
tattacctgcttacgatgcaaggaaaggaatttgtagctattccggctggttcttggtac
aactttaacaaggttgcacaatataaacaacttactctggaagaagcagaagaaaaaatg
aagaaccgtaggaagactgcagatggatatgagagatggatgatgaaagctgcaaataat
ggtgctgctgcatttggtgaagtggagaaggttgatgaaaaagagagtactgctggtggt
gggaagggacgtaaaaagtcaactgctgaggaggaagaaggtcatgtatcagatcgagga
gaggaagatgaagaagaggaagcagccaggaagaataggcttggactcaacaaaaaaagt
ggtgatgatgacgaagaaggtccaaggggaggtgatcttgatatggatgatgatgatatt
gagaagggtgatgactgggaacatgaagaaatattcactgatgatgatgaggccgttggt
aacgatcctgaggaaagggatttggctcctgaagttcctgctcctccggaaatcaaggag
gatgaagatgagcaggatgaagatgaggaaggaggaggactgagcaagtctgggaaagag
ttgcagaaactattagggaaagctagtgggcttgatgaatcagatgcagatgatgatgac
gatgacgatgatgatgatgatgtggaagatgatatgaactttaatcctgtactcgctctt
aaacagaaggatgcacctaaagaagaacctgctgacaacagtccaatgaaaccagcacct
tcagcttctgctaagggaaccgcagcggcatctaagtcatcaaagggaaagagaaaaccc
aatggtggtgatacaaaagcatctaatggtacccctgtgaagaaggttaaatcagaacct
gactcaaaagcttctgtgaaagaggaaaatacaactgcttccaaaggcagtgttcattcc
aaaggcacatcatcttctgcaaaagctggatcaacatcagctgccagtggatcatcatct
tcaaaagcaggttcagcatcagctgctggacatgtaactgaagaagaaatcagagctgtg
ttattacaaaaggcacctgtaacaacatccgatcttgtggctaaatttagagctaggctg
aaaactccagaggacaagaaggtttttgcagacattctcaggcgaatttctaagatacaa
aagacgaacggacctaataactacgtcgtgttgagagaaaagtaa
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